RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MORN2Q502X0 79 aa15.05■□□□□ 0
SMC4-201ENST00000344722 Q6ZS49 121 aa15.05■□□□□ 0
SMC4-201ENST00000344722 SLC25A48Q6ZT89 311 aaKnown RBP15.05■□□□□ 0
SMC4-201ENST00000344722 BRWD1Q9NSI6 2320 aa15.05■□□□□ 0
SMC4-201ENST00000344722 SAA1P0DJI8 122 aaPredicted RBP15.05■□□□□ -0
SMC4-201ENST00000344722 Q6ZT83 130 aa15.05■□□□□ -0
SMC4-201ENST00000344722 A0A1W2PR77 199 aa15.05■□□□□ -0
SMC4-201ENST00000344722 MGST2Q99735 147 aa15.05■□□□□ -0
SMC4-201ENST00000344722 SAA2-SAA4A0A096LPE2 208 aa15.05■□□□□ -0
SMC4-201ENST00000344722 SAA2P0DJI9 122 aaPredicted RBP15.05■□□□□ -0
SMC4-201ENST00000344722 C1orf210Q8IVY1 113 aa15.05■□□□□ -0
SMC4-201ENST00000344722 POLR2AP24928 1970 aaKnown RBP15.04■□□□□ -0
SMC4-201ENST00000344722 SCN10AQ9Y5Y9 1956 aa15.04■□□□□ -0
SMC4-201ENST00000344722 SPATA31B1PQ5VZV4 182 aa15.04■□□□□ -0
SMC4-201ENST00000344722 TGFAP01135 160 aa15.04■□□□□ -0
SMC4-201ENST00000344722 PMS2CLQ68D20 193 aa15.04■□□□□ -0
SMC4-201ENST00000344722 ZFAND6Q6FIF0 208 aa15.04■□□□□ -0
SMC4-201ENST00000344722 PSG7Q13046 419 aa15.04■□□□□ -0
SMC4-201ENST00000344722 GTSF1LQ9H1H1 148 aa15.04■□□□□ -0
SMC4-201ENST00000344722 PNRC2Q9NPJ4 139 aaKnown RBP15.04■□□□□ -0
SMC4-201ENST00000344722 MRPS18CQ9Y3D5 142 aaKnown RBP15.04■□□□□ -0
SMC4-201ENST00000344722 CDX4O14627 284 aaPredicted RBP15.04■□□□□ -0
SMC4-201ENST00000344722 LILRA1O75019 489 aa15.04■□□□□ -0
SMC4-201ENST00000344722 UBTD1Q9HAC8 227 aa15.04■□□□□ -0
SMC4-201ENST00000344722 DNAL4O96015 105 aa15.03■□□□□ -0
SMC4-201ENST00000344722 RNF144BQ7Z419 303 aa15.03■□□□□ -0
SMC4-201ENST00000344722 BCL6BQ8N143 479 aaPredicted RBP15.03■□□□□ -0
SMC4-201ENST00000344722 NAA38Q9BRA0 125 aaKnown RBP15.03■□□□□ -0
SMC4-201ENST00000344722 GEMIN7Q9H840 131 aaKnown RBP15.03■□□□□ -0
SMC4-201ENST00000344722 SEC16AO15027 2179 aa15.03■□□□□ -0
SMC4-201ENST00000344722 SRSF1Q07955 248 aaKnown RBP eCLIP15.03■□□□□ -09e-8■■□□□ 13.7
SMC4-201ENST00000344722 CDCP2Q5VXM1 449 aa15.03■□□□□ -0
SMC4-201ENST00000344722 MRPL20Q9BYC9 149 aaKnown RBP15.03■□□□□ -0
SMC4-201ENST00000344722 NPPCP23582 126 aa15.03■□□□□ -0
SMC4-201ENST00000344722 ASIPP42127 132 aa15.03■□□□□ -0
SMC4-201ENST00000344722 KIR3DS1Q14943 382 aa15.03■□□□□ -0
SMC4-201ENST00000344722 BMPERQ8N8U9 685 aa15.03■□□□□ -0
SMC4-201ENST00000344722 NUP35Q8NFH5 326 aa15.03■□□□□ -0
SMC4-201ENST00000344722 TRIP6Q15654 476 aaKnown RBP15.03■□□□□ -0
SMC4-201ENST00000344722 SHISA5Q8N114 240 aa15.03■□□□□ -0
SMC4-201ENST00000344722 NABP1Q96AH0 204 aa15.03■□□□□ -0
SMC4-201ENST00000344722 FBXL7Q9UJT9 491 aa15.03■□□□□ -0
SMC4-201ENST00000344722 TRBV6-6A0A0A6YYG2 114 aa15.02■□□□□ -0
SMC4-201ENST00000344722 SEPSECSQ9HD40 501 aaKnown RBP15.02■□□□□ -0
SMC4-201ENST00000344722 KIAA0100Q14667 2235 aaKnown RBP15.02■□□□□ -0
SMC4-201ENST00000344722 ZNF56Q15929 161 aa15.02■□□□□ -0
SMC4-201ENST00000344722 MEIG1Q5JSS6 88 aa15.02■□□□□ -0
SMC4-201ENST00000344722 PSG8Q9UQ74 426 aa15.02■□□□□ -0
SMC4-201ENST00000344722 OR10W1Q8NGF6 305 aa15.02■□□□□ -0
SMC4-201ENST00000344722 ALPK2Q86TB3 2170 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 PPIAL4CA0A0B4J2A2 164 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 PPIAL4GP0DN37 164 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 IGLC2P0DOY2 106 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 IGLC3P0DOY3 106 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 FOXA2Q9Y261 457 aaPredicted RBP15.02□□□□□ -0.01
SMC4-201ENST00000344722 TRAV8-4A0A0B4J246 113 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 RPRMLQ8N4K4 120 aa15.02□□□□□ -0.01
SMC4-201ENST00000344722 A0A0G2JMM0 328 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 A0A1W2PPB8 328 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 KIR3DP1A8MWS1 328 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 IGLV3-12A0A075B6K2 115 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 FABP5P3A8MUU1 101 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 M0R381 172 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 FOXH1O75593 365 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 MMP23AO75900 390 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 GAGE2BQ13066 116 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 GAGE2EQ4V326 116 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 SAP25Q8TEE9 199 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 GAGE2DQ9UEU5 116 aa15.01□□□□□ -0.01
SMC4-201ENST00000344722 FAM159AQ6UWV7 190 aa15□□□□□ -0.01
SMC4-201ENST00000344722 EEF1AKMT3Q96AZ1 226 aa15□□□□□ -0.01
SMC4-201ENST00000344722 GLRXP35754 106 aa15□□□□□ -0.01
SMC4-201ENST00000344722 PPP1R32Q7Z5V6 425 aa15□□□□□ -0.01
SMC4-201ENST00000344722 DNASE2BQ8WZ79 361 aa15□□□□□ -0.01
SMC4-201ENST00000344722 VOPP1Q96AW1 172 aa15□□□□□ -0.01
SMC4-201ENST00000344722 FAM74A4Q5TZK3 123 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 ASCL2Q99929 193 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 VKORC1Q9BQB6 163 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 TMEM42Q69YG0 159 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 Q6ZWC4 215 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 C1orf162Q8NEQ5 155 aaPredicted RBP14.99□□□□□ -0.01
SMC4-201ENST00000344722 LINC00312Q9Y6C7 94 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 TRAV5A0A0B4J249 113 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 PATE3B3GLJ2 98 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 CHTOPQ9Y3Y2 248 aaKnown RBP14.99□□□□□ -0.01
SMC4-201ENST00000344722 ATP5G2Q06055 141 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 ORMDL2Q53FV1 153 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 PVRIGQ6DKI7 326 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 MRAP2Q96G30 205 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 MYOFQ9NZM1 2061 aa14.99□□□□□ -0.01
SMC4-201ENST00000344722 CECR9P0C854 216 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 SFTA2Q6UW10 78 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 YPEL3P61236 119 aaPredicted RBP14.98□□□□□ -0.01
SMC4-201ENST00000344722 LYPD6BQ8NI32 183 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 UBE2L6O14933 153 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 EFNA2O43921 213 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 A0A0G2JRQ6 117 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 A0A1B0GUS0 222 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 ZNF815PA8K554 130 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 CACNA1IQ9P0X4 2223 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms