RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TMEM144Q7Z5S9 345 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 PRR14LQ5THK1 2151 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 HIST1H2BAQ96A08 127 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 NAPSAO96009 420 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 CSN3P07498 182 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 FABP4P15090 132 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 CD33P20138 364 aa13.49□□□□□ -0.25
SMARCA4-201ENST00000344626 YLPM1P49750 1951 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 UBE2L6O14933 153 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 SAP30O75446 220 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 PLAURQ03405 335 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 CHAC2Q8WUX2 184 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 RPRMQ9NS64 109 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 TRAV14DV4A0A0A6YYC5 116 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 RAMP3O60896 148 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 PRSS1P07477 247 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 CRISP2P16562 243 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 PRSS8Q16651 343 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 C11orf91Q3C1V1 193 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 GOLT1AQ6ZVE7 132 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 OR52E5Q8NH55 327 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 RNF114Q9Y508 228 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 F8VVB4 439 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 F8VWA3 439 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 APCSP02743 223 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 TEX50A0A1B0GTY4 177 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 ZNF253O75346 499 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 Q6ZN92 141 aa13.48□□□□□ -0.25
SMARCA4-201ENST00000344626 H3BTX0 84 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 TCF21O43680 179 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 HLA-DRB1P01911 266 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 ICAM4Q14773 271 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 LDLRAD4O15165 306 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 CD55P08174 381 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 HTN3P15516 51 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 UBE2E1P51965 193 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 CD300CQ08708 224 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 GTSCR1Q86UQ5 136 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 WISP2O76076 250 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 FAM53AQ6NSI3 398 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 CYB561D1Q8N8Q1 229 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 FOXI3A8MTJ6 420 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 LDLRAD2Q5SZI1 272 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 ASCL4Q6XD76 172 aa13.47□□□□□ -0.25
SMARCA4-201ENST00000344626 TRGC1P0CF51 173 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 HERVK_113P61574 105 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 SETD2Q9BYW2 2564 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 COL4A4P53420 1690 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 DANCRP0C864 163 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 CRYBB3P26998 211 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 PAX8Q06710 450 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 SDHCQ99643 169 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 SLC50A1Q9BRV3 221 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 MYLKQ15746 1914 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 C7orf77A4D0Y5 90 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 FBLL1A6NHQ2 334 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 GGCTO75223 188 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 AMMECR1LQ6DCA0 310 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 TEX38Q6PEX7 206 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 COQ2Q96H96 371 aa13.46□□□□□ -0.25
SMARCA4-201ENST00000344626 MFAP2P55001 183 aa13.46□□□□□ -0.26
SMARCA4-201ENST00000344626 MYOZ3Q8TDC0 251 aa13.46□□□□□ -0.26
SMARCA4-201ENST00000344626 NTF4P34130 210 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 EMP1P54849 157 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 CD5P06127 495 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 IER3P46695 156 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 HERPUD1Q15011 391 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 STHQ8IWL8 128 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 IFT22Q9H7X7 185 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 DUSP14O95147 198 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 GPR61Q9BZJ8 451 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 SNURFLB1AK76 121 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 KLHL30-AS1Q8NEE0 82 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 RNF125Q96EQ8 232 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 SH3BGRL3Q9H299 93 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 IGKV1D-8A0A087WSZ0 117 aa13.45□□□□□ -0.26
SMARCA4-201ENST00000344626 IGLV3-9A0A075B6K5 115 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 TDGF1P3P51864 188 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 ZNF880Q6PDB4 577 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 SGMS2Q8NHU3 365 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 IGHV2-70DA0A0C4DH43 119 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 H0YJW9 148 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 M0R2Z0 102 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 BEND2Q8NDZ0 799 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 FAM110DQ8TAY7 271 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 TMEM167AQ8TBQ9 72 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 PRRC2AP48634 2157 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 LINC00862A6NCI5 91 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 C2orf68Q2NKX9 166 aa13.44□□□□□ -0.26
SMARCA4-201ENST00000344626 USMG5Q96IX5 58 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms