RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 ANKHD1Q8IWZ3 2542 aaKnown RBP17.25■□□□□ 0.35
CCDC38-201ENST00000344280 IGKV1D-37A0A075B6S9 117 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 A0A1W2PN81 502 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 A0A1W2PPI3 338 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 ENSAO43768 121 aaKnown RBP17.24■□□□□ 0.35
CCDC38-201ENST00000344280 NUPR1O60356 82 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 C8orf88P0DMB2 117 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 CBLN1P23435 193 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 ADMP35318 185 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 GNG4P50150 75 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 TMEM256Q8N2U0 113 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 OR4A5Q8NH83 315 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 ARL2-SNX15V9GYD0 113 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 ABCA1O95477 2261 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 CNTFRP26992 372 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 GRNP28799 593 aaKnown RBP17.24■□□□□ 0.35
CCDC38-201ENST00000344280 APOBEC3AP31941 199 aaPredicted RBP17.24■□□□□ 0.35
CCDC38-201ENST00000344280 ERVFC1-1P60608 527 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 SSX8Q7RTT4 187 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 CHODLQ9H9P2 273 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 V9GYV3 84 aa17.24■□□□□ 0.35
CCDC38-201ENST00000344280 APELAP0DMC3 54 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 LGALS4P56470 323 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 TAS2R45P59539 299 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 DNLZQ5SXM8 178 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 C19orf24Q9BVV8 132 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 RNASE7Q9H1E1 156 aaKnown RBP17.23■□□□□ 0.35
CCDC38-201ENST00000344280 TMEM133Q9H2Q1 129 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 LY96Q9Y6Y9 160 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 SNRPCP09234 159 aaKnown RBP17.23■□□□□ 0.35
CCDC38-201ENST00000344280 PYYP10082 97 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 UNQ6494/PRO21346Q6UXR6 183 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 PATE2Q6UY27 113 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 DNAJC4Q9NNZ3 241 aa17.23■□□□□ 0.35
CCDC38-201ENST00000344280 CSMD1Q96PZ7 3565 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 YPEL3P61236 119 aaPredicted RBP17.22■□□□□ 0.35
CCDC38-201ENST00000344280 ASPHD1Q5U4P2 390 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 OR5R1Q8NH85 324 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 VKORC1Q9BQB6 163 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 GRIFINA4D1Z8 144 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 PPOXP50336 477 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 HCP5Q6MZN7 132 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 GBGT1Q8N5D6 347 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 OR5AU1Q8NGC0 362 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 BTF3L4Q96K17 158 aa17.22■□□□□ 0.35
CCDC38-201ENST00000344280 CD3EP07766 207 aa17.21■□□□□ 0.35
CCDC38-201ENST00000344280 UBE2L3P68036 154 aaKnown RBP17.21■□□□□ 0.35
CCDC38-201ENST00000344280 MMD2Q8IY49 270 aa17.21■□□□□ 0.35
CCDC38-201ENST00000344280 LINC00479Q96M42 142 aa17.21■□□□□ 0.35
CCDC38-201ENST00000344280 ATRXP46100 2492 aa17.21■□□□□ 0.35
CCDC38-201ENST00000344280 SIAH2O43255 324 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 IGLV2-8P01709 118 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 MFAP2P55001 183 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 FXYD3Q14802 87 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 VMA21Q3ZAQ7 101 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 LHFPL4Q7Z7J7 247 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 ZNF355PQ9NSJ1 428 aa17.21■□□□□ 0.34
CCDC38-201ENST00000344280 IGHV2-26A0A0B4J1V2 119 aa17.2■□□□□ 0.34
CCDC38-201ENST00000344280 A0A1W2PRE2 83 aa17.2■□□□□ 0.34
CCDC38-201ENST00000344280 B9A039 149 aa17.2■□□□□ 0.34
CCDC38-201ENST00000344280 RBPJQ06330 500 aa17.2■□□□□ 0.34
CCDC38-201ENST00000344280 MRPL32Q9BYC8 188 aaKnown RBP17.2■□□□□ 0.34
CCDC38-201ENST00000344280 TCRBV4S1A1TA0A5B7 111 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 IGLC7A0M8Q6 106 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 FAM90A27PA6NNH2 459 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 COX7A2P2O60397 106 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 MC5RP33032 325 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 OR8I2Q8N0Y5 310 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 NHLRC2Q8NBF2 726 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 TMEM18Q96B42 140 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 ZNF841Q6ZN19 808 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 IGF2BP2-AS1Q96M15 143 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 RALYQ9UKM9 306 aaKnown RBP17.19■□□□□ 0.34
CCDC38-201ENST00000344280 TP53TG3Q9ULZ0 132 aa17.19■□□□□ 0.34
CCDC38-201ENST00000344280 IGHV3-21A0A0B4J1V1 117 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 C22orf46C9J442 243 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 SPINK4O60575 86 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 FSTL3O95633 263 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 MOSP00540 346 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 SUB1P53999 127 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC38-201ENST00000344280 RPEL1Q2QD12 228 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 C10orf113Q5VZT2 155 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 MRPL41Q8IXM3 137 aaKnown RBP17.18■□□□□ 0.34
CCDC38-201ENST00000344280 ZNF705GA8MUZ8 300 aaPredicted RBP17.18■□□□□ 0.34
CCDC38-201ENST00000344280 IER3P46695 156 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 PKIAP61925 76 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 OR1L6Q8NGR2 347 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 SVEP1Q4LDE5 3571 aa17.18■□□□□ 0.34
CCDC38-201ENST00000344280 IGLV1-47P01700 117 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 LGALS7P47929 136 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 SLC35B1P78383 322 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 TNXAQ16473 311 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 TIGITQ495A1 244 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 THAP8Q8NA92 274 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 MISP3Q96FF7 219 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 MRPL18Q9H0U6 180 aaKnown RBP17.17■□□□□ 0.34
CCDC38-201ENST00000344280 DEFA6Q01524 100 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 CDSNQ15517 529 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 MUC15Q8N387 334 aa17.17■□□□□ 0.34
CCDC38-201ENST00000344280 ST6GALNAC3Q8NDV1 305 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms