RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 FBXL15Q9H469 300 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 TNFRSF19Q9NS68 423 aa10.68□□□□□ -0.7
HERPUD1-202ENST00000344114 TRAV1-1A0A0B4J248 108 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 NPFFO15130 113 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 SAA4P35542 130 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 ELLP55199 621 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 WT1-ASQ06250 92 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 ARSJQ5FYB0 599 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 LINC01006Q8NI28 216 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 RNASEH2CQ8TDP1 164 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 CACNG8Q8WXS5 425 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 PBDC1Q9BVG4 233 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 RPRMQ9NS64 109 aa10.67□□□□□ -0.7
HERPUD1-202ENST00000344114 A0A1B0GW64 132 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 IGLC7A0M8Q6 106 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 E7EUB6 86 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 TSPAN9O75954 239 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 OR13C7P0DN81 318 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 BRS3P32247 399 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 GPX4P36969 197 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 OPRK1P41145 380 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 AKR1C1Q04828 323 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 CD69Q07108 199 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 RAB31Q13636 194 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 HES1Q14469 280 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 ACOT6Q3I5F7 207 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 SPSB3Q6PJ21 355 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 TEPPQ6URK8 271 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 CCDC28AQ8IWP9 274 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 DYNAPQ8N1N2 210 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 Q8N6K4 173 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 BPIFCQ8NFQ6 507 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 MBD3L1Q8WWY6 194 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 RCC1LQ96I51 464 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 NARS2Q96I59 477 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 TREM1Q9NP99 234 aa10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 LSM4Q9Y4Z0 139 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-202ENST00000344114 CTXND1A0A1B0GTU2 59 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 CD5P06127 495 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 RUSC1-AS1Q66K80 236 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 TMEM144Q7Z5S9 345 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 SRSF12Q8WXF0 261 aaKnown RBP10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 SLC35E1Q96K37 410 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 P2RX4Q99571 388 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 MGST2Q99735 147 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 GGTLC1Q9BX51 225 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
HERPUD1-202ENST00000344114 IGHV1-69DA0A0B4J2H0 117 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 TMEM218A2RU14 115 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 CORTO00230 105 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 AGPAT2O15120 278 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 IGHV1-69P01742 117 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 TMEM11P17152 192 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 M6PRP20645 277 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 GNB1P62873 340 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 PEA15Q15121 130 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 GUK1Q16774 197 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 BEAN1Q3B7T3 259 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 PVRIGQ6DKI7 326 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 SFT2D1Q8WV19 159 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 AJUBAQ96IF1 538 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 SMDT1Q9H4I9 107 aa10.65□□□□□ -0.71
HERPUD1-202ENST00000344114 MAP1LC3B2A6NCE7 125 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 TEX22C9J3V5 150 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 FAM106CPP0CH98 169 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 SSBP2P81877 361 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 SRSF3P84103 164 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 ZNF726P1Q15940 193 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 KPRPQ5T749 579 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 OR10G4Q8NGN3 311 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 OR10G9Q8NGN4 311 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 OR10G7Q8NGN6 311 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 OR1P1Q8NH06 330 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 C17orf50Q8WW18 174 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 ACTR3CQ9C0K3 210 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 TMEM231Q9H6L2 316 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 PXMP4Q9Y6I8 212 aa10.64□□□□□ -0.71
HERPUD1-202ENST00000344114 KMT2CQ8NEZ4 4911 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 SEC14L6B5MCN3 397 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 CYB5BO43169 146 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 CNIH1O95406 144 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 HNF4GQ14541 408 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 RPP25LQ8N5L8 163 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 SLC39A9Q9NUM3 307 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 FAM96BQ9Y3D0 163 aa10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 F11RQ9Y624 299 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-202ENST00000344114 A0A1B0GV50 99 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms