RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 TMEM133Q9H2Q1 129 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 TECRQ9NZ01 308 aaKnown RBP15.61■□□□□ 0.09
COL9A3-201ENST00000343916 TYMSP04818 313 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 CRYBB3P26998 211 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 ZNF137PP52743 207 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 FAM71F2Q6NXP2 309 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 MUC15Q8N387 334 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 UHRF2Q96PU4 802 aa15.61■□□□□ 0.09
COL9A3-201ENST00000343916 TRAV5A0A0B4J249 113 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 A0A1W2PN81 502 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 OR5G3P0C626 314 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 CDSNQ15517 529 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 MRPL36Q9P0J6 103 aaKnown RBP15.6■□□□□ 0.09
COL9A3-201ENST00000343916 SLC17A3O00476 420 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 EREGO14944 169 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 CNTFRP26992 372 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 PPOXP50336 477 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 ZNF90Q03938 601 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 MRGPRG-AS1Q2M3A8 158 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 CACNG8Q8WXS5 425 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 NPIPB3Q92617 1050 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 C11orf52Q96A22 123 aa15.6■□□□□ 0.09
COL9A3-201ENST00000343916 A0A1W2PPI3 338 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 AREGP15514 252 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 CNN1P51911 297 aaKnown RBP15.59■□□□□ 0.09
COL9A3-201ENST00000343916 LCN2P80188 198 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 OR5I1Q13606 314 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 OR10G8Q8NGN5 311 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 OR4A5Q8NH83 315 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 SLC25A33Q9BSK2 321 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 TMEM167BQ9NRX6 74 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 RALYQ9UKM9 306 aaKnown RBP15.59■□□□□ 0.09
COL9A3-201ENST00000343916 ABCA1O95477 2261 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 IGHV2-26A0A0B4J1V2 119 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 GGTLC3B5MD39 225 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 VMA21Q3ZAQ7 101 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 RUSC1-AS1Q66K80 236 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 C19orf35Q6ZS72 473 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 RAXQ9Y2V3 346 aa15.59■□□□□ 0.09
COL9A3-201ENST00000343916 LY6HO94772 140 aa15.58■□□□□ 0.09
COL9A3-201ENST00000343916 FOXL1Q12952 345 aa15.58■□□□□ 0.09
COL9A3-201ENST00000343916 HCP5Q6MZN7 132 aa15.58■□□□□ 0.09
COL9A3-201ENST00000343916 PQLC2Q6ZP29 291 aa15.58■□□□□ 0.09
COL9A3-201ENST00000343916 EAF1Q96JC9 268 aaPredicted RBP15.58■□□□□ 0.09
COL9A3-201ENST00000343916 PSMB11A5LHX3 300 aa15.58■□□□□ 0.08
COL9A3-201ENST00000343916 INS-IGF2F8WCM5 200 aa15.58■□□□□ 0.08
COL9A3-201ENST00000343916 CCL21O00585 134 aa15.58■□□□□ 0.08
COL9A3-201ENST00000343916 LGALS4P56470 323 aa15.58■□□□□ 0.08
COL9A3-201ENST00000343916 SUMO1P63165 101 aaKnown RBP15.58■□□□□ 0.08
COL9A3-201ENST00000343916 CSMD1Q96PZ7 3565 aa15.58■□□□□ 0.08
COL9A3-201ENST00000343916 COL6A6A6NMZ7 2263 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 MC5RP33032 325 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 CA7P43166 264 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 CASP6P55212 293 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 ZNF841Q6ZN19 808 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 GBGT1Q8N5D6 347 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 TRAPPC1Q9Y5R8 145 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 C8orf88P0DMB2 117 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 TAS2R45P59539 299 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 RPL15P61313 204 aaKnown RBP15.57■□□□□ 0.08
COL9A3-201ENST00000343916 LBHQ53QV2 105 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-201ENST00000343916 CENPWQ5EE01 88 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 TMEM256Q8N2U0 113 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 SLC25A2Q9BXI2 301 aa15.57■□□□□ 0.08
COL9A3-201ENST00000343916 ARHGAP32A7KAX9 2087 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 HELTA6NFD8 242 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 SCGB1D1O95968 90 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 COX7A1P24310 79 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 IMMP2LQ96T52 175 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 ATG101Q9BSB4 218 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 IGKV1D-37A0A075B6S9 117 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 C9JCJ5 164 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 BEND2Q8NDZ0 799 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 FAM167A-AS1Q96KT0 104 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 C19orf24Q9BVV8 132 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 DNAJC4Q9NNZ3 241 aa15.56■□□□□ 0.08
COL9A3-201ENST00000343916 NUPR1O60356 82 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 IGLV1-47P01700 117 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 TNXAQ16473 311 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 IQCJQ1A5X6 159 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 PNKDQ8N490 385 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 IGHV3-21A0A0B4J1V1 117 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 PYYP10082 97 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 GNG4P50150 75 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 SUB1P53999 127 aaKnown RBP eCLIP15.55■□□□□ 0.08
COL9A3-201ENST00000343916 ERVFC1-1P60608 527 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 OR5AU1Q8NGC0 362 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 CBLN4Q9NTU7 201 aa15.55■□□□□ 0.08
COL9A3-201ENST00000343916 IGLC7A0M8Q6 106 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 TCAPO15273 167 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 LGALS7P47929 136 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 UBE2L3P68036 154 aaKnown RBP15.54■□□□□ 0.08
COL9A3-201ENST00000343916 ZNF672Q499Z4 452 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-201ENST00000343916 PATE2Q6UY27 113 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 LHFPL4Q7Z7J7 247 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 ZNF355PQ9NSJ1 428 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 INSIG2Q9Y5U4 225 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 PPIAL4CA0A0B4J2A2 164 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 COX7A2P2O60397 106 aa15.54■□□□□ 0.08
COL9A3-201ENST00000343916 MOSP00540 346 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms