RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 HELTA6NFD8 242 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 COX7A1P24310 79 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 CNN1P51911 297 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 SSX8Q7RTT4 187 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 LHFPL4Q7Z7J7 247 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 C11orf42Q8N5U0 333 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 PRDM13Q9H4Q3 707 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 KAAG1Q9UBP8 84 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 B9A039 149 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 COX7A2P2O60397 106 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 C8orf88P0DMB2 117 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 HIST1H1BP16401 226 aaKnown RBP12□□□□□ -0.49
VIPAS39-202ENST00000343765 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
VIPAS39-202ENST00000343765 UBE2L3P68036 154 aaKnown RBP12□□□□□ -0.49
VIPAS39-202ENST00000343765 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 CACNG8Q8WXS5 425 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 MISP3Q96FF7 219 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 PRO1933Q9H354 126 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 PYYP10082 97 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 CBLN1P23435 193 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 PPOXP50336 477 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 RUSC1-AS1Q66K80 236 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 IMMP2LQ96T52 175 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
VIPAS39-202ENST00000343765 LY6HO94772 140 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 GPX4P36969 197 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 TNXAQ16473 311 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 FAM209BQ5JX69 171 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 ASPHD1Q5U4P2 390 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 FAM71F2Q6NXP2 309 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 MUC15Q8N387 334 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 OR4A5Q8NH83 315 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 ZNF596Q8TC21 504 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 RNASE7Q9H1E1 156 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 SPINK4O60575 86 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 MOSP00540 346 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 FXYD3Q14802 87 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 NHLRC2Q8NBF2 726 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 ZNF355PQ9NSJ1 428 aa11.99□□□□□ -0.49
VIPAS39-202ENST00000343765 C9JCJ5 164 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 SIAH2O43255 324 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 FRMD6-AS1P0C7T7 363 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 MGST1P10620 155 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 ADMP35318 185 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 SUB1P53999 127 aaKnown RBP eCLIP11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 COA6Q5JTJ3 125 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 C8orf31Q8N9H6 132 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 IL36BQ9NZH7 164 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 GRIFINA4D1Z8 144 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 MC5RP33032 325 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 ZNF137PP52743 207 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 CASP6P55212 293 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 FAM167A-AS1Q96KT0 104 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 LINC00479Q96M42 142 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 ITPR1Q14643 2758 aa11.98□□□□□ -0.49
VIPAS39-202ENST00000343765 A0A087X0M5 115 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 A0A1B0GX30 115 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 PSMB11A5LHX3 300 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 CCL21O00585 134 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 MRGPRG-AS1Q2M3A8 158 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 C10orf113Q5VZT2 155 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 TMEM256Q8N2U0 113 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 RNASEH2CQ8TDP1 164 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 CELSR1Q9NYQ6 3014 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 IGKV1D-37A0A075B6S9 117 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 TCL1AP56279 114 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 SLC35B1P78383 322 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 CDSNQ15517 529 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 MRPL41Q8IXM3 137 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 OR8I2Q8N0Y5 310 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 C19orf24Q9BVV8 132 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 INSIG2Q9Y5U4 225 aa11.97□□□□□ -0.49
VIPAS39-202ENST00000343765 ZNF705GA8MUZ8 300 aaPredicted RBP11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 GZMBP10144 247 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 ORM2P19652 201 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 PDLIM4P50479 330 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 TIGITQ495A1 244 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 PATE2Q6UY27 113 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 MMD2Q8IY49 270 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 TCRBV4S1A1TA0A5B7 111 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 IER3P46695 156 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 RPEL1Q2QD12 228 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 OR1L6Q8NGR2 347 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 IGFBPL1Q8WX77 278 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 BTF3L4Q96K17 158 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 COL25A1Q9BXS0 654 aaPredicted RBP11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 V9GYV3 84 aa11.96□□□□□ -0.49
VIPAS39-202ENST00000343765 IGLC7A0M8Q6 106 aa11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 INS-IGF2F8WCM5 200 aa11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 RPL27AP46776 148 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 MFAP2P55001 183 aa11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 PNKDQ8N490 385 aa11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 PAXXQ9BUH6 204 aa11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.5
VIPAS39-202ENST00000343765 ARL2-SNX15V9GYD0 113 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms