RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 TLN2Q9Y4G6 2542 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 TMEM218A2RU14 115 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 SH2D7A6NKC9 451 aaPredicted RBP13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 FGF8P55075 233 aaPredicted RBP13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 GUK1Q16774 197 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 FAM122CQ6P4D5 195 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 THAP8Q8NA92 274 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 LFNGQ8NES3 379 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 NPIPB3Q92617 1050 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 RBM14Q96PK6 669 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 SSX3Q99909 188 aa13.54□□□□□ -0.24
FRMD4A-202ENST00000342409 IGHV3-21A0A0B4J1V1 117 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 CTXND1A0A1B0GTU2 59 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 BTBD17A6NE02 478 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 KRBOX1C9JBD0 128 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 I3L2K1 104 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 GATA2P23769 480 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 ACOT6Q3I5F7 207 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 BCL6BQ8N143 479 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 CIARTQ8N365 385 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 SLC39A9Q9NUM3 307 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 MDFIC2A0A1B0GVS7 189 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 LINC01548A6NM66 108 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 NPIPB5A8MRT5 1133 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 HMGB3O15347 200 aaKnown RBP13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 MT-CO2P00403 227 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 HBE1P02100 147 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 RND2P52198 227 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 B2MP61769 119 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 RAB24Q969Q5 203 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 FANCD2OSQ96PS1 177 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 RARRES2Q99969 163 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 RASL11BQ9BPW5 248 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 TREM1Q9NP99 234 aa13.53□□□□□ -0.24
FRMD4A-202ENST00000342409 A6NDX4 124 aa13.52□□□□□ -0.25
FRMD4A-202ENST00000342409 SOX15O60248 233 aa13.52□□□□□ -0.25
FRMD4A-202ENST00000342409 FBP1P09467 338 aa13.52□□□□□ -0.25
FRMD4A-202ENST00000342409 TTC9CQ8N5M4 171 aa13.52□□□□□ -0.25
FRMD4A-202ENST00000342409 ACTR3CQ9C0K3 210 aaPredicted RBP13.52□□□□□ -0.25
FRMD4A-202ENST00000342409 H3BUX3 64 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 K7EIM0 57 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 CORTO00230 105 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 RAB31Q13636 194 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 C10orf91Q5T1B1 145 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 TMEM116Q8NCL8 245 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 NARS2Q96I59 477 aaKnown RBP13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 KCNIP2Q9NS61 270 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
FRMD4A-202ENST00000342409 RBFOX3A6NFN3 312 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 CDC34P49427 236 aaPredicted RBP13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 CYP2G1PQ6ZSU1 146 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 TMPRSS5Q9H3S3 457 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 IGLV11-55A0A075B6I3 123 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 PSMB11A5LHX3 300 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 ATP6V0E1O15342 81 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 CYB5BO43169 146 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 ZNF90Q03938 601 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 ICAM4Q14773 271 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 LY6EQ16553 131 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 HAGHQ16775 308 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 DEFB112Q30KQ8 113 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 SGMS2Q8NHU3 365 aa13.5□□□□□ -0.25
FRMD4A-202ENST00000342409 TCRBV4S1A1TA0A5B7 111 aa13.49□□□□□ -0.25
FRMD4A-202ENST00000342409 ZNF506Q5JVG8 444 aa13.49□□□□□ -0.25
FRMD4A-202ENST00000342409 EIF5A2Q9GZV4 153 aaKnown RBP13.49□□□□□ -0.25
FRMD4A-202ENST00000342409 GSX1Q9H4S2 264 aaPredicted RBP13.49□□□□□ -0.25
FRMD4A-202ENST00000342409 LOC102723971A0A1B0GUV8 181 aa13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 SFTA3P0C7M3 94 aa13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 PMS2P11Q13670 270 aa13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 CYB5R2Q6BCY4 276 aa13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 C22orf15Q8WYQ4 148 aa13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 SEPSECSQ9HD40 501 aaKnown RBP13.48□□□□□ -0.25
FRMD4A-202ENST00000342409 BPIFB3P59826 476 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 PEA15Q15121 130 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 TMEM37Q8WXS4 190 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 TRGV9Q99603 122 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 FOXC2Q99958 501 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 PBDC1Q9BVG4 233 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 GNG13Q9P2W3 67 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 ACANP16112 2415 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 STAG3L2P0CL84 134 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 STAG3L3P0CL85 134 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 KLK9Q2XQG4 91 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 C19orf54Q5BKX5 351 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 C9orf139Q6ZV77 190 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 OR1L6Q8NGR2 347 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 OR4X1Q8NH49 305 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 GATAD1Q8WUU5 269 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 TNFRSF19Q9NS68 423 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 KLK9Q9UKQ9 250 aa13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 CARHSP1Q9Y2V2 147 aaKnown RBP13.47□□□□□ -0.25
FRMD4A-202ENST00000342409 ZFP92A6NM28 416 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 G3V318 75 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms