RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.04■□□□□ -0
SYNE2-201ENST00000341472 GPR132Q9UNW8 380 aa15.04■□□□□ -0
SYNE2-201ENST00000341472 DYNC2H1Q8NCM8 4307 aaKnown RBP15.04■□□□□ -0
SYNE2-201ENST00000341472 TRAV14DV4A0A0A6YYC5 116 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 A0A0G2JRQ6 117 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 HOXA1P49639 335 aaPredicted RBP15.03■□□□□ -0
SYNE2-201ENST00000341472 Q6ZRM9 215 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 FAM219AQ8IW50 185 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 TMEM116Q8NCL8 245 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 OR51S1Q8NGJ8 323 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 RHPN1-AS1Q9BWJ2 59 aa15.03■□□□□ -0
SYNE2-201ENST00000341472 IGHV7-4-1A0A0J9YVY3 117 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 LINC00854A0A1B0GVQ3 168 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 OR4C46A6NHA9 309 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 CORTO00230 105 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 CHEK1O14757 476 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 RNASE2P10153 161 aaKnown RBP15.02■□□□□ -0
SYNE2-201ENST00000341472 SPCS3P61009 180 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 IFITM3Q01628 133 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 ASAH1Q13510 395 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 PVRIGQ6DKI7 326 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 MZT2BQ6NZ67 158 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 SELENOHQ8IZQ5 122 aaKnown RBP15.02■□□□□ -0
SYNE2-201ENST00000341472 IL17DQ8TAD2 202 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 RBPMSQ93062 196 aaKnown RBP15.02■□□□□ -0
SYNE2-201ENST00000341472 ZNF414Q96IQ9 312 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 OR10C1Q96KK4 312 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 SCGB3A2Q96PL1 93 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 MCUBQ9NWR8 336 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 UBQLN2Q9UHD9 624 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 SCP2D1Q9UJQ7 156 aa15.02■□□□□ -0
SYNE2-201ENST00000341472 IGHV3-49A0A0A0MS15 119 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 PLA2G10O15496 165 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 LYRM1O43325 122 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 TOMM20LQ6UXN7 152 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 RNF2Q99496 336 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 KCNIP3Q9Y2W7 256 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 TENM2Q9NT68 2774 aa15.01□□□□□ -0.01
SYNE2-201ENST00000341472 CRYM-AS1A6NIL9 109 aa15□□□□□ -0.01
SYNE2-201ENST00000341472 TMEM50AO95807 157 aa15□□□□□ -0.01
SYNE2-201ENST00000341472 OR52E5Q8NH55 327 aa15□□□□□ -0.01
SYNE2-201ENST00000341472 LHFPL5Q8TAF8 219 aa15□□□□□ -0.01
SYNE2-201ENST00000341472 GPR146Q96CH1 333 aa15□□□□□ -0.01
SYNE2-201ENST00000341472 GINS3Q9BRX5 216 aa15□□□□□ -0.01
SYNE2-201ENST00000341472 CMC4P56277 68 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-201ENST00000341472 MLANAQ16655 118 aa14.99□□□□□ -0.01
SYNE2-201ENST00000341472 AARDQ4LEZ3 155 aa14.99□□□□□ -0.01
SYNE2-201ENST00000341472 TMEM268Q5VZI3 342 aa14.99□□□□□ -0.01
SYNE2-201ENST00000341472 ZNF600Q6ZNG1 722 aa14.99□□□□□ -0.01
SYNE2-201ENST00000341472 TBC1D24Q9ULP9 559 aa14.99□□□□□ -0.01
SYNE2-201ENST00000341472 TMEM56-RWDD3S4R434 201 aa14.99□□□□□ -0.01
SYNE2-201ENST00000341472 IGHV3OR16-13A0A075B7E8 117 aa14.98□□□□□ -0.01
SYNE2-201ENST00000341472 IGHV3-74A0A0B4J1X5 117 aa14.98□□□□□ -0.01
SYNE2-201ENST00000341472 BMI1P35226 326 aa14.98□□□□□ -0.01
SYNE2-201ENST00000341472 APOC4P55056 127 aa14.98□□□□□ -0.01
SYNE2-201ENST00000341472 SLC25A21Q9BQT8 299 aaPredicted RBP14.98□□□□□ -0.01
SYNE2-201ENST00000341472 OVOL2Q9BRP0 275 aa14.98□□□□□ -0.01
SYNE2-201ENST00000341472 HEYLQ9NQ87 328 aaPredicted RBP14.98□□□□□ -0.01
SYNE2-201ENST00000341472 CACNG5Q9UF02 275 aa14.98□□□□□ -0.01
SYNE2-201ENST00000341472 OPRK1P41145 380 aa14.97□□□□□ -0.01
SYNE2-201ENST00000341472 HTR2BP41595 481 aa14.97□□□□□ -0.01
SYNE2-201ENST00000341472 TFPI2P48307 235 aa14.97□□□□□ -0.01
SYNE2-201ENST00000341472 ODF3L2Q3SX64 289 aa14.97□□□□□ -0.01
SYNE2-201ENST00000341472 CACFD1Q9UGQ2 172 aa14.97□□□□□ -0.01
SYNE2-201ENST00000341472 PUS1Q9Y606 427 aaKnown RBP eCLIP14.97□□□□□ -0.01
SYNE2-201ENST00000341472 CEBPZOSA8MTT3 80 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 UBE2CO00762 179 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 CLN5O75503 358 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 CD5P06127 495 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 PAFAH1B2P68402 229 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 TMEM187Q14656 261 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 BSXQ3C1V8 233 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 FAM90A2PQ658T7 463 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 OR4X1Q8NH49 305 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 IL22RA2Q969J5 263 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 GALNT14Q96FL9 552 aa14.96□□□□□ -0.01
SYNE2-201ENST00000341472 FNDC4Q9H6D8 234 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-201ENST00000341472 SACSQ9NZJ4 4579 aa14.96□□□□□ -0.02
SYNE2-201ENST00000341472 IGKV3-7A0A075B6H7 116 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 FAM240BA0A1B0GVZ2 78 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 SCGB2A1O75556 95 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 AKR1C4P17516 323 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 RBMS2Q15434 407 aaKnown RBP14.95□□□□□ -0.02
SYNE2-201ENST00000341472 Q6ZWC4 215 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 TCF24Q7RTU0 167 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 GBGT1Q8N5D6 347 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 TMEM230Q96A57 120 aa14.95□□□□□ -0.02
SYNE2-201ENST00000341472 MRPL36Q9P0J6 103 aaKnown RBP14.95□□□□□ -0.02
SYNE2-201ENST00000341472 KIR2DL5BA0A0G2JN68 375 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 KIR2DL5BA0A0G2JPC4 375 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 A0A1B0GU03 582 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 RPS10-NUDT3A0A1W2PQS6 291 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 APOHP02749 345 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-201ENST00000341472 SULT1A3P0DMM9 295 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 SULT1A4P0DMN0 295 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 RPL35AP18077 110 aaKnown RBP14.94□□□□□ -0.02
SYNE2-201ENST00000341472 NPPCP23582 126 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 KIR2DL5AQ8N109 375 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 STPG3Q8N7X2 389 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 KIR2DL5BQ8NHK3 375 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms