RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CORO2AQ92828 525 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 ZNF503Q96F45 646 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 DKK4Q9UBT3 224 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
CPSF7-201ENST00000340437 MIEN1Q9BRT3 115 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 FOXA2Q9Y261 457 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-201ENST00000340437 PTPN13Q12923 2485 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 MOSP00540 346 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 APCSP02743 223 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 RAB4AP20338 218 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 PRR20EP86478 221 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 PRR20CP86479 221 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 PRR20DP86480 221 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 PRR20BP86481 221 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 PRR20AP86496 221 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 C21orf62-AS1Q17RA5 79 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 Q6ZN92 141 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 KALRNO60229 2985 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 KIR2DL5BA0A0G2JN68 375 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 KIR2DL5BA0A0G2JPC4 375 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 UPK2O00526 184 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 GPX1P07203 203 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 KIR2DL5AQ8N109 375 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 TMEM208Q9BTX3 173 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 DYSFO75923 2080 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 A0A1W2PN81 502 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 IGHG3P01860 377 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 C8orf88P0DMB2 117 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 Q56UQ5 140 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 Q6ZVH6 145 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 TLN2Q9Y4G6 2542 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 AREGP15514 252 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 ERHP84090 104 aaKnown RBP11.73□□□□□ -0.53
CPSF7-201ENST00000340437 LEMD1Q68G75 181 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 OR2D3Q8NGH3 330 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
CPSF7-201ENST00000340437 TRGV8A0A0C4DH27 118 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 A0A1W2PS18 150 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 CORTO00230 105 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 IGLV1-44P01699 117 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 TMPRSS3P57727 454 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 SEM1Q6ZVN7 128 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 NEUROG1Q92886 237 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 AMMECR1Q9Y4X0 333 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-201ENST00000340437 M0QZ24 198 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 HSBP1O75506 76 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-201ENST00000340437 OR1B1Q8NGR6 318 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 APOA2P02652 100 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 ZNF137PP52743 207 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 SELENOTP62341 195 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
CPSF7-201ENST00000340437 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 SLAQ13239 276 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 ERASQ7Z444 233 aa11.72□□□□□ -0.53
CPSF7-201ENST00000340437 BMPR1BO00238 502 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-201ENST00000340437 CX3CL1P78423 397 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 GAFA1Q96PS6 74 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 ASCL2Q99929 193 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 PAXXQ9BUH6 204 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 AKAP13Q12802 2813 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 C9JCJ5 164 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 GLRXP35754 106 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 C1orf162Q8NEQ5 155 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-201ENST00000340437 ST6GALNAC6Q969X2 333 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
CPSF7-201ENST00000340437 GSX1Q9H4S2 264 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-201ENST00000340437 PIEZO1Q92508 2521 aa11.71□□□□□ -0.54
CPSF7-201ENST00000340437 SLC25A17O43808 307 aa11.71□□□□□ -0.54
CPSF7-201ENST00000340437 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.54
CPSF7-201ENST00000340437 TNFSF4P23510 183 aa11.71□□□□□ -0.54
CPSF7-201ENST00000340437 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.54
CPSF7-201ENST00000340437 GNB1LQ9BYB4 327 aa11.71□□□□□ -0.54
CPSF7-201ENST00000340437 TACC2O95359 2948 aa11.71□□□□□ -0.54
CPSF7-201ENST00000340437 ISLRO14498 428 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 TCF21O43680 179 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 AMY1AP04745 511 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 C3orf79P0CE67 100 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
CPSF7-201ENST00000340437 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
CPSF7-201ENST00000340437 UBE2G1P62253 170 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 TMEM249Q2WGJ8 235 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
CPSF7-201ENST00000340437 SLC25A10Q9UBX3 287 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms