RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TRGC2P03986 189 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 COL8A1P27658 744 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 RANP62826 216 aaKnown RBP8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 CD69Q07108 199 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 DPM3Q9P2X0 92 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 A0A1B0GW64 132 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 ITGB1BP1O14713 200 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 CXorf1O96002 111 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 FLI1Q01543 452 aaPredicted RBP8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 OR5I1Q13606 314 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 FBLN7Q53RD9 439 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM219Q86XT9 240 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 MMD2Q8IY49 270 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 ASCL2Q99929 193 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 NDUFA4L2Q9NRX3 87 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 SELENOKQ9Y6D0 94 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 F6UZH7 168 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 RNF224P0DH78 156 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 ATP5J2P56134 94 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 PRSS8Q16651 343 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 Q8N7P7 452 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 ZNF114Q8NC26 417 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 AMMECR1Q9Y4X0 333 aaPredicted RBP8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 RD3LP0DJH9 198 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 HABP2Q14520 560 aaPredicted RBP8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 SIGLEC9Q9Y336 463 aa8.17□□□□□ -1.1
RBFOX1-202ENST00000340209 CLDN34H7C241 214 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 MPDU1O75352 247 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 S100PP25815 95 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 GALR1P47211 349 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 FXYD3Q14802 87 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 FAM210BQ96KR6 192 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 CCL19Q99731 98 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 TMUB1Q9BVT8 246 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 KCNIP2Q9NS61 270 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 IGHV3OR16-13A0A075B7E8 117 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 IGHV3-74A0A0B4J1X5 117 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 MDFIC2A0A1B0GVS7 189 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 FAM90A9PA6NNJ1 464 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 SLC17A3O00476 420 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 IGLV2-23P01705 113 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 LY6EQ16553 131 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 NEU4Q8WWR8 484 aaPredicted RBP8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 ST6GALNAC6Q969X2 333 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 C1orf159Q96HA4 380 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 LINC00479Q96M42 142 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 NCOR1P1Q9H4R4 102 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 NPPCP23582 126 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 RAB4BP61018 213 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 C10orf113Q5VZT2 155 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 NANPQ8TBE9 248 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM37Q8WXS4 190 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 GNB4Q9HAV0 340 aa8.16□□□□□ -1.1
RBFOX1-202ENST00000340209 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 GNG5P63218 68 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 TPTE2P1Q5T6R2 138 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 CYP2G1PQ6ZSU1 146 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 WNT10AQ9GZT5 417 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 ZNF257Q9Y2Q1 563 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 LGALS7P47929 136 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM30BQ3MIR4 351 aa8.15□□□□□ -1.1
RBFOX1-202ENST00000340209 CGB1A6NKQ9 187 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 VENTXO95231 258 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 IGLV1-47P01700 117 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 TMEM11P17152 192 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 CEACAM3P40198 252 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 ELOBQ15370 118 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 Q56UQ5 140 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 LINC00305Q7Z4B0 112 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 FUT9Q9Y231 359 aa8.15□□□□□ -1.11
RBFOX1-202ENST00000340209 PRSS46E5RG02 174 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 STAG3L3P0CL85 134 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 C2orf83Q53S99 150 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 SEBOXQ9HB31 216 aaPredicted RBP8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 WNK1Q9H4A3 2382 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 A6NNC1 897 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 FAM120AOSQ5T036 256 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 LINC00574Q9H8X3 128 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 IGHV3-49A0A0A0MS15 119 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 ZNF320A2RRD8 509 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 OR2J3O76001 311 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms