RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NUPL2O15504 423 aaKnown RBP11.58□□□□□ -0.56
UBE3B-201ENST00000340074 GNG7O60262 68 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 LY86O95711 162 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 IFNA10P01566 189 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 IFNA21P01568 189 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 FOLR2P14207 255 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 NPY1RP25929 384 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 DUSP18Q8NEJ0 188 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 CACNG8Q8WXS5 425 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
UBE3B-201ENST00000340074 U3KQ87 197 aa11.58□□□□□ -0.56
UBE3B-201ENST00000340074 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
UBE3B-201ENST00000340074 NRARPQ7Z6K4 114 aa11.57□□□□□ -0.56
UBE3B-201ENST00000340074 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
UBE3B-201ENST00000340074 ZNF431Q8TF32 576 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-201ENST00000340074 ZNF414Q96IQ9 312 aa11.57□□□□□ -0.56
UBE3B-201ENST00000340074 MAGT1Q9H0U3 335 aa11.57□□□□□ -0.56
UBE3B-201ENST00000340074 NDUFA4O00483 81 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 MED6O75586 246 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 TGP01266 2768 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 IAPPP10997 89 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 GP9P14770 177 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 CBLN1P23435 193 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 NPBWR1P48145 328 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 NOXA1Q86UR1 476 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 DYNLRB2Q8TF09 96 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 TMEM190Q8WZ59 177 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 OR10C1Q96KK4 312 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
UBE3B-201ENST00000340074 IGHV3OR16-8A0A075B7F1 116 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 RPS10-NUDT3A0A1W2PQS6 291 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 WRBO00258 174 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 SYNGR2O43760 224 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 TMEM50AO95807 157 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 DEFA1P59665 94 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 DEFA3P59666 94 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-201ENST00000340074 DEFB121Q5J5C9 76 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 UXS1Q8NBZ7 420 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 C20orf24Q9BUV8 137 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 UFC1Q9Y3C8 167 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
UBE3B-201ENST00000340074 CCSO14618 274 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 CLN5O75503 358 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 IFNA4P05014 189 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 ELLP55199 621 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-201ENST00000340074 ID3Q02535 119 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 IAH1Q2TAA2 248 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-201ENST00000340074 DEFB114Q30KQ6 69 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 CD300EQ496F6 205 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-201ENST00000340074 OR4D5Q8NGN0 318 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
UBE3B-201ENST00000340074 C15orf62A8K5M9 175 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 IL5P05113 134 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 SLC25A4P12235 298 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 NKX2-1P43699 371 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 ETFRF1Q6IPR1 90 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 LCN12Q6JVE5 192 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 PRSS54Q6PEW0 395 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 C12orf45Q8N5I9 185 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 CIB3Q96Q77 187 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 DAZ1Q9NQZ3 744 aaKnown RBP11.53□□□□□ -0.56
UBE3B-201ENST00000340074 GSKIPQ9P0R6 139 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 MLXQ9UH92 298 aa11.53□□□□□ -0.56
UBE3B-201ENST00000340074 YIF1AO95070 293 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 SCGB1D2O95969 90 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 C8orf88P0DMB2 117 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 RND2P52198 227 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 CD69Q07108 199 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 ZBTB8BQ8NAP8 495 aaPredicted RBP11.52□□□□□ -0.56
UBE3B-201ENST00000340074 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 OR2K2Q8NGT1 345 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 MARC2Q969Z3 335 aa11.52□□□□□ -0.56
UBE3B-201ENST00000340074 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.56
UBE3B-201ENST00000340074 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.56
UBE3B-201ENST00000340074 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.56
UBE3B-201ENST00000340074 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.56
UBE3B-201ENST00000340074 FAM25EA8MYX2 175 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 INMT-MINDY4F8WBC2 141 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 H3BP45 60 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 K7EMT4 169 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 SSSCA1O60232 199 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 RAB11AP62491 216 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 ZNF600Q6ZNG1 722 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 SLC16A13Q7RTY0 426 aa11.52□□□□□ -0.57
UBE3B-201ENST00000340074 GPN1Q9HCN4 374 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-201ENST00000340074 COL7A1Q02388 2944 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 TRAV30A0A087WSZ9 112 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 C5orf51A6NDU8 294 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
UBE3B-201ENST00000340074 TIGITQ495A1 244 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 SPANXN5Q5MJ07 72 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 TOMM20LQ6UXN7 152 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 NPIPB3Q92617 1050 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms