RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CRYBB2P43320 205 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM255AQ5JRV8 349 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TBC1D26Q86UD7 250 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ARL17AQ8IVW1 177 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 C11orf44Q8N8P7 122 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TAF15Q92804 592 aaKnown RBP eCLIP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM54Q969K7 222 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RASL10BQ96S79 203 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RPL36A-HNRNPH2H7BZ11 118 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 RPL31P62899 125 aaKnown RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CEACAM16Q2WEN9 425 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 C9orf62Q8N4C0 152 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF502Q8TBZ5 544 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TBX15Q96SF7 602 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 PARP12Q9H0J9 701 aaKnown RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 LRP12Q9Y561 859 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 A8MXK9 166 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 PAGE4O60829 102 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 FCGR3BO75015 233 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 IGHMP01871 453 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 FABP5Q01469 135 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 LCN12Q6JVE5 192 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TEX38Q6PEX7 206 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 C16orf82Q7Z2V1 217 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TLN1Q9Y490 2541 aaKnown RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 EMDP50402 254 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF324BQ6AW86 544 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF841Q6ZN19 808 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF843Q8N446 348 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 PPP1R3EQ9H7J1 279 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 F8WEM9 126 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 SRSF10O75494 262 aaKnown RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 PPIAL4GP0DN37 164 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 LYL1P12980 280 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 NPPCP23582 126 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 GLRXP35754 106 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CEACAM6P40199 344 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 EWSR1Q01844 656 aaKnown RBP eCLIP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 PSG5Q15238 335 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TM4SF20Q53R12 229 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 SPATA46Q5T0L3 261 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 SPCS1Q9Y6A9 102 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TCRBV5S2A0A599 114 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CCL25O15444 150 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF324O75467 553 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CXCL2P19875 107 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 IL11P20809 199 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 BSPH1Q075Z2 132 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 GAGE13Q4V321 117 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 SHISA2Q6UWI4 295 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 NKAIN4Q8IVV8 208 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 EEF1AKMT3Q96AZ1 226 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ARHGAP5-AS1Q96IT6 56 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM106BQ9NUM4 274 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CALYQ9NYX4 217 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ST6GALNAC2Q9UJ37 374 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 TRBV6-7A0A0A0MS04 114 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 MARCH11A6NNE9 402 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 FABP5P3A8MUU1 101 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 NCR2O95944 276 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 HTN3P15516 51 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CXorf67Q86X51 503 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CRIPAKQ8N1N5 446 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZIC4Q8N9L1 334 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 SMIM14Q96QK8 99 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 IGKV3-7A0A075B6H7 116 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ASPDHA6ND91 283 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ZP1P60852 638 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 Q0VFX4 171 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 OCIAD2Q56VL3 154 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 COQ2Q96H96 371 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 LINC00052Q96N35 136 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 ANAPC13Q9BS18 74 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 AGMATQ9BSE5 352 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 REG4Q9BYZ8 158 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 OR2H1Q9GZK4 316 aa2.78□□□□□ -1.96
CSMD3-202ENST00000339701 MRM2Q9UI43 246 aaKnown RBP2.78□□□□□ -1.96
CSMD3-202ENST00000339701 CEACAM18A8MTB9 384 aa2.78□□□□□ -1.97
CSMD3-202ENST00000339701 H0YIZ8 118 aa2.78□□□□□ -1.97
CSMD3-202ENST00000339701 CD40P25942 277 aa2.78□□□□□ -1.97
CSMD3-202ENST00000339701 XAF1Q6GPH4 301 aa2.78□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF818PQ6ZRF7 136 aa2.78□□□□□ -1.97
CSMD3-202ENST00000339701 IGFBPL1Q8WX77 278 aa2.78□□□□□ -1.97
CSMD3-202ENST00000339701 SLC25A39Q9BZJ4 359 aaPredicted RBP2.78□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1W2PRD5 423 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1W2PRF3 423 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1W2PRM7 423 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 CAMPP49913 170 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 EFNB1P98172 346 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 LOXL1Q08397 574 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C3AR1Q16581 482 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 PAQR4Q8N4S7 273 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 FNDC4Q9H6D8 234 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 CDC42EP2O14613 210 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 OVOL1O14753 267 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IGHG4P01861 327 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IFITM1P13164 125 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 MPV17P39210 176 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms