RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 SPATA46Q5T0L3 261 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 Q6ZR03 302 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 OR51H1Q8NH63 302 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 LRRC29Q8WV35 223 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 PERPQ96FX8 193 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 SPANXB1Q9NS25 103 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 TSSC4Q9Y5U2 329 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 C15orf62A8K5M9 175 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 FXYD3Q14802 87 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 SLC25A53Q5H9E4 307 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 C10orf128Q5T292 105 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 C9orf135Q5VTT2 229 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 RASL11AQ6T310 242 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 LHFPL2Q6ZUX7 228 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 GTF2H5Q6ZYL4 71 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 FGFRL1Q8N441 504 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 STPG3Q8N7X2 389 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 OR2K2Q8NGT1 345 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 PHLDA1Q8WV24 401 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 ZDHHC16Q969W1 377 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 NAA38Q9BRA0 125 aaKnown RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 A0A0G2JLM5 398 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 IZUMO1RA6ND01 250 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A10PA6NDY2 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A18PA6NE21 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A16PA6NEW6 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A20PA6NIJ5 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A8PA6NJQ4 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A7PA6NKC0 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A22PA8MWA6 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A12PA8MX19 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A5PA8MXJ8 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A23PA8MXZ1 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 F5H5K5 113 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 H3BUT2 72 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FOXH1O75593 365 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A15PP0C7V4 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A13PP0C7W8 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A14PP0C7W9 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A24PP0C7X0 464 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 NRN1LQ496H8 165 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 TMEM97Q5BJF2 176 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 LINC01545Q5VT33 79 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ACP7Q6ZNF0 438 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 DOLPP1Q86YN1 238 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 MS4A6AQ9H2W1 248 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 PTPRQQ9UMZ3 2332 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZG16O60844 167 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 SSR4P51571 173 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CLRN1P58418 232 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 GABRA6Q16445 453 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ABHD17BQ5VST6 288 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 VSTM2AQ8TAG5 236 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 BLNKQ8WV28 456 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ST8SIA1Q92185 356 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 H1FXQ92522 213 aaKnown RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF503Q96F45 646 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 MGST2Q99735 147 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 C7orf69Q9H7B7 122 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 OR1A1Q9P1Q5 309 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ACACBO00763 2458 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ANKRD30BLA7E2S9 258 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 M0R135 149 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 KLK10O43240 276 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 SYNGR3O43761 229 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CA1P00915 261 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 DEFB109BQ30KR1 87 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CENPWQ5EE01 88 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF788Q6ZQV5 615 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 OR5A1Q8NGJ0 315 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 OR10AG1Q8NH19 301 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 OR52E5Q8NH55 327 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 OR2T6Q8NHC8 308 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 TMEM54Q969K7 222 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 SPSB4Q96A44 273 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF799Q96GE5 643 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 MCRIP2Q9BUT9 160 aaKnown RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 JPT1Q9UK76 154 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CACNA1BQ00975 2339 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ITPR2Q14571 2701 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 USP9XQ93008 2570 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 DIDO1Q9BTC0 2240 aaKnown RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 hCG_38984A0A1B0GV85 526 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 LRRC30A6NM36 301 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CD300LBA8K4G0 201 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 GUCA1AP43080 201 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 TMPRSS3P57727 454 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 HTD2P86397 168 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 FHL3Q13643 280 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CEACAM21Q3KPI0 293 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 TREML4Q6UXN2 200 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 TPRX1Q8N7U7 411 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF837Q96EG3 531 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF442Q9H7R0 627 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 CLCF1Q9UBD9 225 aa4.56□□□□□ -1.68
CSDE1-202ENST00000339438 LSM4Q9Y4Z0 139 aaKnown RBP4.56□□□□□ -1.68
CSDE1-202ENST00000339438 ZFYVE26Q68DK2 2539 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 OR11H12B2RN74 326 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms