RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 Q9H3A6 140 aa11.46□□□□□ -0.58
RTN4-202ENST00000337526 RAXQ9Y2V3 346 aa11.46□□□□□ -0.58
RTN4-202ENST00000337526 IGHV3OR16-8A0A075B7F1 116 aa11.46□□□□□ -0.58
RTN4-202ENST00000337526 ATXN7O15265 892 aaPredicted RBP11.46□□□□□ -0.58
RTN4-202ENST00000337526 IGHV3-23P01764 117 aa11.46□□□□□ -0.58
RTN4-202ENST00000337526 FHL1Q13642 323 aa11.46□□□□□ -0.58
RTN4-202ENST00000337526 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.58
RTN4-202ENST00000337526 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.58
RTN4-202ENST00000337526 CD69Q07108 199 aa11.45□□□□□ -0.58
RTN4-202ENST00000337526 CIARTQ8N365 385 aaPredicted RBP11.45□□□□□ -0.58
RTN4-202ENST00000337526 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
RTN4-202ENST00000337526 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
RTN4-202ENST00000337526 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
RTN4-202ENST00000337526 FOXF2Q12947 444 aa11.45□□□□□ -0.58
RTN4-202ENST00000337526 SEMA5BQ9P283 1151 aa11.45□□□□□ -0.58
RTN4-202ENST00000337526 PSPNO60542 156 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 PYYP10082 97 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
RTN4-202ENST00000337526 ZNF256Q9Y2P7 627 aaPredicted RBP11.44□□□□□ -0.58
RTN4-202ENST00000337526 LAMTOR2Q9Y2Q5 125 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 NTN3O00634 580 aaPredicted RBP11.44□□□□□ -0.58
RTN4-202ENST00000337526 SRSF4Q08170 494 aaKnown RBP11.44□□□□□ -0.58
RTN4-202ENST00000337526 CSRP2Q16527 193 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 Q6AWC8 147 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 HIST3H2BBQ8N257 126 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 M0R381 172 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 C5orf24Q7Z6I8 188 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
RTN4-202ENST00000337526 GNG5P63218 68 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 FAM57AQ8TBR7 257 aa11.44□□□□□ -0.58
RTN4-202ENST00000337526 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 IGKV1-5P01602 117 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 CEACAM1P13688 526 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 PRCDQ00LT1 54 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 C1QL4Q86Z23 238 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 RSPO3Q9BXY4 272 aaPredicted RBP11.43□□□□□ -0.58
RTN4-202ENST00000337526 IGHV3OR16-10A0A075B7F0 116 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 FOXH1O75593 365 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 GPR183P32249 361 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 ABHD17AQ96GS6 310 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 EPDR1Q9UM22 224 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 A0A1B0GW64 132 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 TRGV3P03979 118 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 SMIM13P0DJ93 91 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 ATP5J2P56134 94 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 HGFACQ04756 655 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 TMEM42Q69YG0 159 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 PPP1R27Q86WC6 154 aa11.43□□□□□ -0.58
RTN4-202ENST00000337526 HEATR5AQ86XA9 2040 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 TCF20Q9UGU0 1960 aaKnown RBP11.42□□□□□ -0.58
RTN4-202ENST00000337526 VWA8A3KMH1 1905 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 IGHV3OR16-12A0A075B7B8 117 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 GGTLC1Q9BX51 225 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 RLFQ13129 1914 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 A0A1B0GW15 77 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 AMBPP02760 352 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 SPRR3Q9UBC9 169 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 TTC9CQ8N5M4 171 aa11.42□□□□□ -0.58
RTN4-202ENST00000337526 TCRBV4S1A1TA0A5B7 111 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 FAM90A9PA6NNJ1 464 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 SRRM5B3KS81 715 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 TIMP3P35625 211 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 ZNF56Q15929 161 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 ZNF581Q9P0T4 197 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 IGHV1-18A0A0C4DH31 117 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 ATP5LO75964 103 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 TSPOP30536 169 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 PLAURQ03405 335 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 PRB3Q04118 309 aaPredicted RBP11.41□□□□□ -0.58
RTN4-202ENST00000337526 TMEM14EPQ6UXP3 125 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 FER1L6-AS1Q8NA97 138 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 ARPC1AQ92747 370 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 CHODLQ9H9P2 273 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
RTN4-202ENST00000337526 PRSS8Q16651 343 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 GNB1LQ9BYB4 327 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 OTORQ9NRC9 128 aa11.41□□□□□ -0.58
RTN4-202ENST00000337526 PAPPA-AS1Q5QFB9 102 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 NIT1Q86X76 327 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 SIP14410 1827 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 C9JCJ5 164 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 SELLP14151 372 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 TMEM170BQ5T4T1 132 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 PIMREGQ9BSJ6 248 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.58
RTN4-202ENST00000337526 RPUSD1Q9UJJ7 312 aaKnown RBP11.4□□□□□ -0.58
RTN4-202ENST00000337526 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms