RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CCL20P78556 96 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 RBM14Q96PK6 669 aaKnown RBP18.43■□□□□ 0.54
TSEN54-201ENST00000333213 C1RLQ9NZP8 487 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 H3BQ15 152 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 AMY1AP04745 511 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 REG1AP05451 166 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 RNASE2P10153 161 aaKnown RBP18.43■□□□□ 0.54
TSEN54-201ENST00000333213 NPY1RP25929 384 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 CX3CL1P78423 397 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 SLC25A33Q9BSK2 321 aa18.43■□□□□ 0.54
TSEN54-201ENST00000333213 FAM103A1Q9BTL3 118 aaKnown RBP18.43■□□□□ 0.54
TSEN54-201ENST00000333213 PUS1Q9Y606 427 aaKnown RBP eCLIP18.43■□□□□ 0.54
TSEN54-201ENST00000333213 A0A1W2PN81 502 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 CD5LO43866 347 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 CHRNA7P36544 502 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 ICAM4Q14773 271 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 FXYD3Q14802 87 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 LY6EQ16553 131 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 ZNF562Q6V9R5 426 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 C19orf35Q6ZS72 473 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 SLC35E3Q7Z769 313 aa18.42■□□□□ 0.54
TSEN54-201ENST00000333213 ZNF48Q96MX3 618 aaPredicted RBP18.42■□□□□ 0.54
TSEN54-201ENST00000333213 A6NDX4 124 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 SH2D7A6NKC9 451 aaPredicted RBP18.41■□□□□ 0.54
TSEN54-201ENST00000333213 B4DEV8 164 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 CNIH1O95406 144 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 OR8U8P0C7N1 319 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 SLC38A11Q08AI6 406 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 C5orf56Q8N8D9 126 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 HSPB9Q9BQS6 159 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 IGHV7-81A0A0B4J1V7 117 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 IFNA5P01569 189 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 RPP30P78346 268 aaKnown RBP18.41■□□□□ 0.54
TSEN54-201ENST00000333213 ERHP84090 104 aaKnown RBP18.41■□□□□ 0.54
TSEN54-201ENST00000333213 OR10P1Q8NGE3 313 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 TVP23CQ96ET8 276 aa18.41■□□□□ 0.54
TSEN54-201ENST00000333213 HBG1P69891 147 aa18.4■□□□□ 0.54
TSEN54-201ENST00000333213 HBG2P69892 147 aa18.4■□□□□ 0.54
TSEN54-201ENST00000333213 C2orf83Q53S99 150 aa18.4■□□□□ 0.54
TSEN54-201ENST00000333213 SSMEM1Q8WWF3 244 aa18.4■□□□□ 0.54
TSEN54-201ENST00000333213 P2RX4Q99571 388 aa18.4■□□□□ 0.54
TSEN54-201ENST00000333213 PARD6GQ9BYG4 376 aaPredicted RBP18.4■□□□□ 0.54
TSEN54-201ENST00000333213 TMPRSS5Q9H3S3 457 aa18.4■□□□□ 0.54
TSEN54-201ENST00000333213 SONP18583 2426 aaKnown RBP18.4■□□□□ 0.54
TSEN54-201ENST00000333213 IGHV4-59P01825 116 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 HLA-DRB1P01911 266 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 SMR3AQ99954 134 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 PSMG3Q9BT73 122 aaPredicted RBP18.39■□□□□ 0.53
TSEN54-201ENST00000333213 RFNGQ9Y644 331 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 EGR2P11161 476 aaPredicted RBP18.39■□□□□ 0.53
TSEN54-201ENST00000333213 RBMS3Q6XE24 437 aaKnown RBP18.39■□□□□ 0.53
TSEN54-201ENST00000333213 LILRB2Q8N423 598 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 RASL11BQ9BPW5 248 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 NIPSNAP3BQ9BS92 247 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 OR51M1Q9H341 326 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 MOB4Q9Y3A3 225 aa18.39■□□□□ 0.53
TSEN54-201ENST00000333213 LOC102723971A0A1B0GUV8 181 aa18.38■□□□□ 0.53
TSEN54-201ENST00000333213 TAGLN2P37802 199 aaKnown RBP18.38■□□□□ 0.53
TSEN54-201ENST00000333213 IER3P46695 156 aa18.38■□□□□ 0.53
TSEN54-201ENST00000333213 MFAP2P55001 183 aa18.38■□□□□ 0.53
TSEN54-201ENST00000333213 ASPHD1Q5U4P2 390 aa18.38■□□□□ 0.53
TSEN54-201ENST00000333213 LINC01548A6NM66 108 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 RAB11AP62491 216 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 ARPC1AQ92747 370 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 PINX1Q96BK5 328 aaKnown RBP18.37■□□□□ 0.53
TSEN54-201ENST00000333213 A0A1B0GV50 99 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 FABP1P07148 127 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 S100PP25815 95 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 PNRC1Q12796 327 aaPredicted RBP18.37■□□□□ 0.53
TSEN54-201ENST00000333213 MLANAQ16655 118 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 HAGHQ16775 308 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 VWC2Q2TAL6 325 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 MBD3L1Q8WWY6 194 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 DMRT1Q9Y5R6 373 aa18.37■□□□□ 0.53
TSEN54-201ENST00000333213 BAHCC1Q9P281 2608 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 TGOLN2O43493 480 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 HOXA5P20719 270 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 DLK1P80370 383 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 RUNX1Q01196 453 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 PMS2P11Q13670 270 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 Q6YL49 198 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 SLC16A13Q7RTY0 426 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 PRDM13Q9H4Q3 707 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 YAE1D1Q9NRH1 226 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 TMEM242Q9NWH2 141 aa18.36■□□□□ 0.53
TSEN54-201ENST00000333213 SERF2P84101 59 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 PVRIGQ6DKI7 326 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 ZNF114Q8NC26 417 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 GSN-AS1Q9NRJ2 163 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 UBE2L5PA0A1B0GUS4 154 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 ATP5IP56385 69 aaPredicted RBP18.35■□□□□ 0.53
TSEN54-201ENST00000333213 ELOBQ15370 118 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 ARSJQ5FYB0 599 aaPredicted RBP18.35■□□□□ 0.53
TSEN54-201ENST00000333213 SPNS3Q6ZMD2 512 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 CYB561D1Q8N8Q1 229 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 SRSF8Q9BRL6 282 aaKnown RBP18.35■□□□□ 0.53
TSEN54-201ENST00000333213 NIT2Q9NQR4 276 aa18.35■□□□□ 0.53
TSEN54-201ENST00000333213 CLN5O75503 358 aa18.34■□□□□ 0.53
TSEN54-201ENST00000333213 ATP6V1FQ16864 119 aa18.34■□□□□ 0.53
TSEN54-201ENST00000333213 SCGB1C1Q8TD33 95 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms