RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 UMODP07911 640 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 C9orf153Q5TBE3 101 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 LHFPL6Q9Y693 200 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 Q6AWC8 147 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 ARAP2Q8WZ64 1704 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
PTCH1-201ENST00000331920 ZXDCQ2QGD7 858 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-201ENST00000331920 SLC50A1Q9BRV3 221 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 ASPHD2Q6ICH7 369 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 TRGV11A0A075B6L2 103 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 SIGLEC15Q6ZMC9 328 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 C1QL2Q7Z5L3 287 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 ZIC4Q8N9L1 334 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 SDK2Q58EX2 2172 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 WNK2Q9Y3S1 2297 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 FAM27E3Q08E93 113 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 A0A1B0GW15 77 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 TCTEX1D4Q5JR98 221 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 ACP7Q6ZNF0 438 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 PEX11BO96011 259 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 C1QAP02745 245 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 OR10W1Q8NGF6 305 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
PTCH1-201ENST00000331920 RICTORQ6R327 1708 aa13.77□□□□□ -0.2
PTCH1-201ENST00000331920 IGKV2-40A0A087WW87 121 aaPredicted RBP13.77□□□□□ -0.2
PTCH1-201ENST00000331920 TRAV13-1A0A0B4J241 112 aa13.77□□□□□ -0.2
PTCH1-201ENST00000331920 IGKV2D-40P01614 121 aaPredicted RBP13.77□□□□□ -0.2
PTCH1-201ENST00000331920 NOVP48745 357 aa13.77□□□□□ -0.2
PTCH1-201ENST00000331920 OTORQ9NRC9 128 aa13.77□□□□□ -0.2
PTCH1-201ENST00000331920 C17orf98A8MV24 154 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 RAMP1O60894 148 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 C1orf159Q96HA4 380 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 SEC11AP67812 179 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 FSTP19883 344 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 THAP8Q8NA92 274 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 UBE2E2Q96LR5 201 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
PTCH1-201ENST00000331920 DUSP14O95147 198 aaKnown RBP13.76□□□□□ -0.21
PTCH1-201ENST00000331920 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-201ENST00000331920 RHOGP84095 191 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-201ENST00000331920 A0A1W2PPV9 198 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 CFHR5Q9BXR6 569 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 SLC25A47Q6Q0C1 308 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 Q96M66 194 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 FAM216BQ8N7L0 139 aa13.76□□□□□ -0.21
PTCH1-201ENST00000331920 LINC01465Q8N7H1 131 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 OR5P3Q8WZ94 311 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 A0A1W2PRS3 328 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 SPINK8P0C7L1 97 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 PYYP10082 97 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 ABHD17AQ96GS6 310 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
PTCH1-201ENST00000331920 PLSCR4Q9NRQ2 329 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 FOXS1O43638 330 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 IFI27L1Q96BM0 104 aa13.75□□□□□ -0.21
PTCH1-201ENST00000331920 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■■■□ 23.7
PTCH1-201ENST00000331920 MDS2Q8NDY4 140 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 SCN7AQ01118 1682 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 CXorf51AA0A1B0GTR3 108 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 MYLKQ15746 1914 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 CD55P08174 381 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 C1QCP02747 245 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 RPL15P61313 204 aaKnown RBP13.74□□□□□ -0.21
PTCH1-201ENST00000331920 TMEM219Q86XT9 240 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 SPXQ9BT56 116 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 ZNF831Q5JPB2 1677 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 Q5BKY6 102 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 TPTE2P1Q5T6R2 138 aa13.74□□□□□ -0.21
PTCH1-201ENST00000331920 ZNF501Q96CX3 271 aaPredicted RBP13.74□□□□□ -0.21
PTCH1-201ENST00000331920 A0A087X0K7 114 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 LIMS2Q7Z4I7 341 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 C1QL4Q86Z23 238 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 DEPPQ9NTK1 212 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 CRIM1Q9NZV1 1036 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-201ENST00000331920 NBR2O15453 112 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 TRAV9-2A0A087WT02 112 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 PRSS23O95084 383 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 PAX8Q06710 450 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 POC1AQ8NBT0 407 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 SS18Q15532 418 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 CFHR3Q02985 330 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 NKAPP1Q8N9T2 125 aa13.73□□□□□ -0.21
PTCH1-201ENST00000331920 F8VVB4 439 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 F8VWA3 439 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 DLX4Q92988 240 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-201ENST00000331920 RNF125Q96EQ8 232 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 TRAV40A0A0B4J280 105 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms