RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 HBDP02042 147 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 ZNF329Q86UD4 541 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 SEPSECSQ9HD40 501 aaKnown RBP8.86□□□□□ -0.99
CLN8-201ENST00000331222 TICRRQ7Z2Z1 1910 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 LY6HO94772 140 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 Q5BKY6 102 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 SPACA3Q8IXA5 215 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 OR10W1Q8NGF6 305 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 MRPL32Q9BYC8 188 aaKnown RBP8.86□□□□□ -0.99
CLN8-201ENST00000331222 ST20Q9HBF5 79 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 VMO1Q7Z5L0 202 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 SAA2-SAA4A0A096LPE2 208 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 C12orf77C9JDV5 145 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 SAA2P0DJI9 122 aaPredicted RBP8.86□□□□□ -0.99
CLN8-201ENST00000331222 CGB3P0DN86 165 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 H2BFSP57053 126 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 IFI27L2Q9H2X8 130 aa8.86□□□□□ -0.99
CLN8-201ENST00000331222 C8orf82Q6P1X6 216 aaPredicted RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 LCNL1Q6ZST4 164 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 SPRR3Q9UBC9 169 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 THBDP07204 575 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 ZNF345Q14585 488 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 TTC9CQ8N5M4 171 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 C17orf100A8MU93 164 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 ZNF660Q6AZW8 331 aaPredicted RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 SDHCQ99643 169 aaPredicted RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 SHANK1Q9Y566 2161 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 DENND4AQ7Z401 1863 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 ACACAQ13085 2346 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 MT-ND6P03923 174 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 SRSF6Q13247 344 aaKnown RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 PUSL1Q8N0Z8 303 aaKnown RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 CHCHD2Q9Y6H1 151 aaPredicted RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 RIF1Q5UIP0 2472 aaKnown RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 PYYP10082 97 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 KLHL30-AS1Q8NEE0 82 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
CLN8-201ENST00000331222 IMMP1LQ96LU5 166 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 DEPPQ9NTK1 212 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 SLC25A15Q9Y619 301 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 PCNX2A6NKB5 2137 aa8.85□□□□□ -0.99
CLN8-201ENST00000331222 TRGV1A0A0A0MS02 117 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.84□□□□□ -0.99
CLN8-201ENST00000331222 MLNRO43193 412 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
CLN8-201ENST00000331222 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
CLN8-201ENST00000331222 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 SMIM8Q96KF7 97 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 ZNF48Q96MX3 618 aaPredicted RBP8.84□□□□□ -0.99
CLN8-201ENST00000331222 NCKAP5O14513 1909 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 A0A0G2JK05 382 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 KBTBD11-OT1A0A1B0GTJ5 212 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 A0A1B0GUT8 65 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 ZNF600Q6ZNG1 722 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 A0A087WX48 190 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 NPIPB13A6NJU9 1138 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 NPIPB5A8MRT5 1133 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 NBR2O15453 112 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 LILRA1O75019 489 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 FOXF2Q12947 444 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 ZNF257Q9Y2Q1 563 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 FSTP19883 344 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 IGFL4Q6B9Z1 124 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 SP7Q8TDD2 431 aaPredicted RBP8.84□□□□□ -0.99
CLN8-201ENST00000331222 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 GZMMP51124 257 aa8.84□□□□□ -0.99
CLN8-201ENST00000331222 RPP21Q9H633 154 aaKnown RBP8.84□□□□□ -0.99
CLN8-201ENST00000331222 GATAD1Q8WUU5 269 aa8.84□□□□□ -1
CLN8-201ENST00000331222 C19orf24Q9BVV8 132 aa8.84□□□□□ -1
CLN8-201ENST00000331222 SPCS1Q9Y6A9 102 aa8.84□□□□□ -1
CLN8-201ENST00000331222 IRF3Q14653 427 aa8.83□□□□□ -1
CLN8-201ENST00000331222 SIGLEC15Q6ZMC9 328 aa8.83□□□□□ -1
CLN8-201ENST00000331222 RNF182Q8N6D2 247 aa8.83□□□□□ -1
CLN8-201ENST00000331222 FAM181AQ8N9Y4 354 aa8.83□□□□□ -1
CLN8-201ENST00000331222 MRPS18AQ9NVS2 196 aaKnown RBP8.83□□□□□ -1
CLN8-201ENST00000331222 TMEM249Q2WGJ8 235 aa8.83□□□□□ -1
CLN8-201ENST00000331222 TMEM155Q4W5P6 130 aa8.83□□□□□ -1
CLN8-201ENST00000331222 STPG2Q8N412 459 aa8.83□□□□□ -1
CLN8-201ENST00000331222 TIMM23O14925 209 aa8.83□□□□□ -1
CLN8-201ENST00000331222 SLC25A38Q96DW6 304 aa8.83□□□□□ -1
CLN8-201ENST00000331222 TRBV5-5A0A0J9YX44 114 aa8.83□□□□□ -1
CLN8-201ENST00000331222 RCHY1Q96PM5 261 aa8.83□□□□□ -1
CLN8-201ENST00000331222 COL5A3P25940 1745 aaPredicted RBP8.83□□□□□ -1
CLN8-201ENST00000331222 CGB7P0DN87 165 aa8.83□□□□□ -1
CLN8-201ENST00000331222 LINC00477Q96M19 166 aa8.83□□□□□ -1
CLN8-201ENST00000331222 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
CLN8-201ENST00000331222 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
CLN8-201ENST00000331222 FAM110DQ8TAY7 271 aaPredicted RBP8.82□□□□□ -1
CLN8-201ENST00000331222 GTF3AQ92664 365 aaKnown RBP8.82□□□□□ -1
CLN8-201ENST00000331222 RBM38Q9H0Z9 239 aaKnown RBP8.82□□□□□ -1
CLN8-201ENST00000331222 PIN1P1O15428 100 aa8.82□□□□□ -1
CLN8-201ENST00000331222 PAX8Q06710 450 aa8.82□□□□□ -1
CLN8-201ENST00000331222 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
CLN8-201ENST00000331222 JPT2Q9H910 190 aa8.82□□□□□ -1
CLN8-201ENST00000331222 TMEM8BA6NDV4 472 aa8.82□□□□□ -1
CLN8-201ENST00000331222 GATA4P43694 442 aa8.82□□□□□ -1
CLN8-201ENST00000331222 DMRTC2Q8IXT2 367 aaPredicted RBP8.82□□□□□ -1
CLN8-201ENST00000331222 SAXO1Q8IYX7 474 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms