RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 TP53RKQ96S44 253 aa13.44□□□□□ -0.26
RAB28-202ENST00000330852 PDCD10Q9BUL8 212 aa13.44□□□□□ -0.26
RAB28-202ENST00000330852 UBQLN2Q9UHD9 624 aa13.44□□□□□ -0.26
RAB28-202ENST00000330852 IGHV3OR16-8A0A075B7F1 116 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 IGKV1-5P01602 117 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 ATF4P18848 351 aaPredicted RBP13.43□□□□□ -0.26
RAB28-202ENST00000330852 TNFRSF9Q07011 255 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 PINX1Q96BK5 328 aaKnown RBP13.43□□□□□ -0.26
RAB28-202ENST00000330852 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 RNF2Q99496 336 aa13.43□□□□□ -0.26
RAB28-202ENST00000330852 A0A0B4J293 547 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 PLA2G10O15496 165 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 RAB3DO95716 219 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 IFNA17P01571 189 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 PI3P19957 117 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 UCP1P25874 307 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
RAB28-202ENST00000330852 RRNAD1Q96FB5 475 aaKnown RBP13.42□□□□□ -0.26
RAB28-202ENST00000330852 RABL2AQ9UBK7 228 aaPredicted RBP13.42□□□□□ -0.26
RAB28-202ENST00000330852 RABL2BQ9UNT1 228 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 ST8SIA3O43173 380 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 PAFAH1B2P68402 229 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 MEF2DQ14814 521 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 STEAP1BQ6NZ63 245 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 RNF183Q96D59 192 aa13.42□□□□□ -0.26
RAB28-202ENST00000330852 IZUMO4Q1ZYL8 232 aa13.41□□□□□ -0.26
RAB28-202ENST00000330852 FAM90A2PQ658T7 463 aa13.41□□□□□ -0.26
RAB28-202ENST00000330852 ZNF600Q6ZNG1 722 aa13.41□□□□□ -0.26
RAB28-202ENST00000330852 FAM219AQ8IW50 185 aa13.41□□□□□ -0.26
RAB28-202ENST00000330852 MAP6D1Q9H9H5 199 aa13.41□□□□□ -0.26
RAB28-202ENST00000330852 ENY2Q9NPA8 101 aa13.41□□□□□ -0.26
RAB28-202ENST00000330852 SURF2Q15527 256 aaPredicted RBP13.4□□□□□ -0.26
RAB28-202ENST00000330852 TOMM20LQ6UXN7 152 aa13.4□□□□□ -0.26
RAB28-202ENST00000330852 TMEM217Q8N7C4 229 aa13.4□□□□□ -0.26
RAB28-202ENST00000330852 OR13C8Q8NGS7 320 aa13.4□□□□□ -0.26
RAB28-202ENST00000330852 SCGB2A1O75556 95 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 TMEM50AO95807 157 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 IGHV3-48P01763 117 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 SCGB2B2Q4G0G5 96 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 PYDC2Q56P42 97 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 TMEM231Q9H6L2 316 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 VSIRQ9H7M9 311 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 DNAH1Q9P2D7 4330 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 TRAV2A0A0B4J234 112 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 CCNKO75909 580 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 CDS2O95674 445 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 RNASE2P10153 161 aaKnown RBP13.39□□□□□ -0.27
RAB28-202ENST00000330852 SP6Q3SY56 376 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 AARDQ4LEZ3 155 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 OR52E5Q8NH55 327 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
RAB28-202ENST00000330852 MARCH1Q8TCQ1 289 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 ST6GAL2Q96JF0 529 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
RAB28-202ENST00000330852 C14orf166Q9Y224 244 aaKnown RBP13.39□□□□□ -0.27
RAB28-202ENST00000330852 A0A0J9YWU9 116 aa13.38□□□□□ -0.27
RAB28-202ENST00000330852 NUPR2A6NF83 97 aa13.38□□□□□ -0.27
RAB28-202ENST00000330852 HOXA1P49639 335 aaPredicted RBP13.38□□□□□ -0.27
RAB28-202ENST00000330852 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
RAB28-202ENST00000330852 TCF24Q7RTU0 167 aa13.38□□□□□ -0.27
RAB28-202ENST00000330852 SMIM4Q8WVI0 70 aa13.38□□□□□ -0.27
RAB28-202ENST00000330852 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.38□□□□□ -0.27
RAB28-202ENST00000330852 CACFD1Q9UGQ2 172 aa13.38□□□□□ -0.27
RAB28-202ENST00000330852 IGHV3-49A0A0A0MS15 119 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 CTDSPLO15194 276 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 DFFBO76075 338 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 RPL35AP18077 110 aaKnown RBP13.37□□□□□ -0.27
RAB28-202ENST00000330852 SPCS3P61009 180 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 DHODHQ02127 395 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 GATAD1Q8WUU5 269 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 CSTL1Q9H114 145 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
RAB28-202ENST00000330852 PUS1Q9Y606 427 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB28-202ENST00000330852 A0A1W2PS18 150 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 CLN5O75503 358 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 IFITM2Q01629 132 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 BSXQ3C1V8 233 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 OR4X1Q8NH49 305 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 TRAV30A0A087WSZ9 112 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 TEX13DA0A0J9YY54 714 aaPredicted RBP13.36□□□□□ -0.27
RAB28-202ENST00000330852 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 CXorf65A6NEN9 183 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 MPTX1A8MV57 137 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 HTR2BP41595 481 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 NKX2-5P52952 324 aaPredicted RBP13.36□□□□□ -0.27
RAB28-202ENST00000330852 GLYATL2Q8WU03 294 aa13.36□□□□□ -0.27
RAB28-202ENST00000330852 RBPMSQ93062 196 aaKnown RBP13.36□□□□□ -0.27
RAB28-202ENST00000330852 RTBDNQ9BSG5 229 aaPredicted RBP13.36□□□□□ -0.27
RAB28-202ENST00000330852 RPS10-NUDT3A0A1W2PQS6 291 aa13.35□□□□□ -0.27
RAB28-202ENST00000330852 OR5AC1P0C628 307 aa13.35□□□□□ -0.27
RAB28-202ENST00000330852 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
RAB28-202ENST00000330852 NPPCP23582 126 aa13.35□□□□□ -0.27
RAB28-202ENST00000330852 OPRK1P41145 380 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms