RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SPCS1Q9Y6A9 102 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 TNCP24821 2201 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 MED13Q9UHV7 2174 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 PLXNA4Q9HCM2 1894 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 LINC00473A8K010 186 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 H7C2G1 150 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 CECR9P0C854 216 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF138P52744 262 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 MGST2Q99735 147 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 C19orf24Q9BVV8 132 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 DENND4AQ7Z401 1863 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 PPIAL4EA0A075B759 164 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 IGHV3OR16-8A0A075B7F1 116 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 C21orf140B9A014 251 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 PPIAL4FP0DN26 164 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 TSPOP30536 169 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
EPHB3-201ENST00000330394 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 NKX2-8O15522 239 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 OR52E5Q8NH55 327 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 A0A087X0K7 114 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 MGPP08493 103 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 GFRALQ6UXV0 394 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
EPHB3-201ENST00000330394 RALYQ9UKM9 306 aaKnown RBP11.67□□□□□ -0.54
EPHB3-201ENST00000330394 A0A1B0GUT8 65 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 UBE2V1Q13404 147 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 ASPHD1Q5U4P2 390 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 GGNQ86UU5 652 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 DEFB123Q8N688 67 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 KIR3DL3Q8N743 410 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 OR4C13Q8NGP0 309 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 GPR82Q96P67 336 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
EPHB3-201ENST00000330394 PLXNB1O43157 2135 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 C15orf62A8K5M9 175 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 KLK10O43240 276 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 GFRA1P56159 465 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 MLANAQ16655 118 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 MORN2Q502X0 79 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 TMEM160Q9NX00 188 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 PCNX3Q9H6A9 2034 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 SAA2-SAA4A0A096LPE2 208 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 A0A1W2PRE2 83 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 IGLV3-19P01714 112 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 SAA2P0DJI9 122 aaPredicted RBP11.66□□□□□ -0.54
EPHB3-201ENST00000330394 OR10J3Q5JRS4 329 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 C10orf55Q5SWW7 151 aa11.66□□□□□ -0.54
EPHB3-201ENST00000330394 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
EPHB3-201ENST00000330394 PSG1P11464 419 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 HAPLN4Q86UW8 402 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 DEFB124Q8NES8 71 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 NUDT10Q8NFP7 164 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 NUDT11Q96G61 164 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 C20orf144Q9BQM9 153 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.54
EPHB3-201ENST00000330394 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 PLXNB3Q9ULL4 1909 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 TYMSP04818 313 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 TDRG1Q3Y452 100 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 WDR82Q6UXN9 313 aa11.65□□□□□ -0.54
EPHB3-201ENST00000330394 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.55
EPHB3-201ENST00000330394 SAA1P0DJI8 122 aaPredicted RBP11.65□□□□□ -0.55
EPHB3-201ENST00000330394 FXYD7P58549 80 aa11.65□□□□□ -0.55
EPHB3-201ENST00000330394 TPTE2P1Q5T6R2 138 aa11.65□□□□□ -0.55
EPHB3-201ENST00000330394 PRELID3AQ96N28 172 aa11.65□□□□□ -0.55
EPHB3-201ENST00000330394 PRDM6Q9NQX0 595 aa11.65□□□□□ -0.55
EPHB3-201ENST00000330394 FAM181BA6NEQ2 426 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 C15orf61A6NNL5 157 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 IL4P05112 153 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
EPHB3-201ENST00000330394 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 IGHV1-2P23083 117 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 ZCCHC24Q8N2G6 241 aaKnown RBP11.64□□□□□ -0.55
EPHB3-201ENST00000330394 F2Z2F3 143 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 CCL3L1P16619 93 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 NRN1LQ496H8 165 aa11.64□□□□□ -0.55
EPHB3-201ENST00000330394 MRPL20Q9BYC9 149 aaKnown RBP11.64□□□□□ -0.55
EPHB3-201ENST00000330394 A0A1W2PS18 150 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 CX3CL1P78423 397 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 Q6ZT83 130 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 PLXNA2O75051 1894 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 ASCL4Q6XD76 172 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 NUPR1O60356 82 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 STPG4Q8N801 248 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 WDR31Q8NA23 367 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 OR2K2Q8NGT1 345 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
EPHB3-201ENST00000330394 FAM90A27PA6NNH2 459 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms