RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 H0YJW9 148 aa12.46□□□□□ -0.42
BRCC3-201ENST00000330045 M0R143 59 aa12.46□□□□□ -0.42
BRCC3-201ENST00000330045 MGST1P10620 155 aaKnown RBP12.46□□□□□ -0.42
BRCC3-201ENST00000330045 TNFRSF1AP19438 455 aa12.46□□□□□ -0.42
BRCC3-201ENST00000330045 IBA57Q5T440 356 aaKnown RBP12.46□□□□□ -0.42
BRCC3-201ENST00000330045 NUP37Q8NFH4 326 aa12.46□□□□□ -0.42
BRCC3-201ENST00000330045 DNAJC4Q9NNZ3 241 aa12.46□□□□□ -0.42
BRCC3-201ENST00000330045 MSRB2Q9Y3D2 182 aa12.46□□□□□ -0.42
BRCC3-201ENST00000330045 TRAV5A0A0B4J249 113 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 E7EUB6 86 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 K7ENP7 123 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 CCL3L1P16619 93 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 SLC35B1P78383 322 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 MEF2CQ06413 473 aaPredicted RBP12.45□□□□□ -0.42
BRCC3-201ENST00000330045 COX19Q49B96 90 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 MORN5Q5VZ52 161 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 OR5AN1Q8NGI8 311 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 FLYWCH2Q96CP2 140 aaKnown RBP12.45□□□□□ -0.42
BRCC3-201ENST00000330045 FAM167A-AS1Q96KT0 104 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 RNF2Q99496 336 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 SLC25A2Q9BXI2 301 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 GNB4Q9HAV0 340 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 SH3BGRL2Q9UJC5 107 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 REG1BP48304 166 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 TCL1AP56279 114 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 TEX43Q6ZNM6 134 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
BRCC3-201ENST00000330045 TCAPO15273 167 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 USF1P22415 310 aaPredicted RBP12.44□□□□□ -0.42
BRCC3-201ENST00000330045 CDKN1AP38936 164 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 UBE2L3P68036 154 aaKnown RBP12.44□□□□□ -0.42
BRCC3-201ENST00000330045 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 A0A1W2PN81 502 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 SMIM27A0A1W2PRY6 76 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 INS-IGF2F8WCM5 200 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 KIAA1644Q3SXP7 199 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 TDRG1Q3Y452 100 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM108Q6UXF1 575 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 SIGLECL1Q8N7X8 197 aa12.44□□□□□ -0.42
BRCC3-201ENST00000330045 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
BRCC3-201ENST00000330045 BRS3P32247 399 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM200BQ69YZ2 307 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
BRCC3-201ENST00000330045 OR4C13Q8NGP0 309 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 VN1R17PQ8TDU5 208 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 C17orf100A8MU93 164 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 AMY1AP04745 511 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 GPX1P07203 203 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 RAB4AP20338 218 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
BRCC3-201ENST00000330045 ZNF705AQ6ZN79 300 aaPredicted RBP12.43□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM167AQ8TBQ9 72 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 CDC42EP3Q9UKI2 254 aa12.43□□□□□ -0.42
BRCC3-201ENST00000330045 PIEZO1Q92508 2521 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 COX7A2P2O60397 106 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM183BQ1AE95 376 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
BRCC3-201ENST00000330045 OR10X1Q8NGY0 326 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 OR4A5Q8NH83 315 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 VSTM2AQ8TAG5 236 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 FAM57AQ8TBR7 257 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 LINC00479Q96M42 142 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 NEU1Q99519 415 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
BRCC3-201ENST00000330045 FNDC4Q9H6D8 234 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-201ENST00000330045 ZNF355PQ9NSJ1 428 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 ITPR1Q14643 2758 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 FCN3O75636 299 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 TDGF1P3P51864 188 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 ADIPOQQ15848 244 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 PDPNQ86YL7 162 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 NHLRC2Q8NBF2 726 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 OR1L4Q8NGR5 311 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 NPIPB3Q92617 1050 aa12.42□□□□□ -0.42
BRCC3-201ENST00000330045 ZNF430Q9H8G1 570 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-201ENST00000330045 CGB1A6NKQ9 187 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 HLA-DQA1P01909 254 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 PYYP10082 97 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 C10orf113Q5VZT2 155 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 H1FXQ92522 213 aaKnown RBP12.41□□□□□ -0.42
BRCC3-201ENST00000330045 PAXXQ9BUH6 204 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 VAMP8Q9BV40 100 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 PAM16Q9Y3D7 125 aa12.41□□□□□ -0.42
BRCC3-201ENST00000330045 AMMECR1Q9Y4X0 333 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-201ENST00000330045 PPIAL4EA0A075B759 164 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 PPIAL4DF5H284 164 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 ZNF253O75346 499 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 PPIAL4FP0DN26 164 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 SUB1P53999 127 aaKnown RBP eCLIP12.4□□□□□ -0.42
BRCC3-201ENST00000330045 DIAPH2-AS1Q14236 149 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms