RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 SMAD7O15105 426 aaKnown RBP9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 SRSF4Q08170 494 aaKnown RBP9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 DOCK3Q8IZD9 2030 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 LINC00587B1AMM8 73 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 NAPSAO96009 420 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 CXCL1P09341 107 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 CKAP5Q14008 2032 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 IGKV3OR2-268A0A0C4DH90 116 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 PGPEP1LA6NFU8 196 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 NEUROG1Q92886 237 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 FAM71F2Q6NXP2 309 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 TTC9CQ8N5M4 171 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 COLCA2A8K830 154 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 RNF144BQ7Z419 303 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 OR10W1Q8NGF6 305 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 BEX4Q9NWD9 120 aaPredicted RBP9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 TRAV5A0A0B4J249 113 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 LYL1P12980 280 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 TEX38Q6PEX7 206 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 ASCL2Q99929 193 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 COL4A6Q14031 1691 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 C19orf67A6NJJ6 358 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 CACNG7P62955 275 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 NMSQ5H8A3 153 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 MGST2Q99735 147 aa9.03□□□□□ -0.96
SNRNP200-201ENST00000323853 TRBV6-6A0A0A6YYG2 114 aa9.02□□□□□ -0.96
SNRNP200-201ENST00000323853 FABP5P3A8MUU1 101 aa9.02□□□□□ -0.96
SNRNP200-201ENST00000323853 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.02□□□□□ -0.96
SNRNP200-201ENST00000323853 RNASE1P07998 156 aaKnown RBP9.02□□□□□ -0.96
SNRNP200-201ENST00000323853 ARTNQ5T4W7 220 aa9.02□□□□□ -0.96
SNRNP200-201ENST00000323853 SAMD13Q5VXD3 122 aa9.02□□□□□ -0.96
SNRNP200-201ENST00000323853 PF4P02776 101 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 FHL1Q13642 323 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 TMEM42Q69YG0 159 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 CYB5R2Q6BCY4 276 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 FOXL2NBQ6ZUU3 175 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 CHCHD1Q96BP2 118 aaKnown RBP9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 B3GALT5-AS1P59052 145 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 TSKUQ8WUA8 353 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 ZNF257Q9Y2Q1 563 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 MYO7AQ13402 2215 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 SCGB1A1P11684 91 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 HGFACQ04756 655 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 ZCCHC24Q8N2G6 241 aaKnown RBP9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 ITLN2Q8WWU7 325 aaPredicted RBP9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 C7orf69Q9H7B7 122 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 PSMG4Q5JS54 123 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 Q6P435 159 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 ATP5L2Q7Z4Y8 100 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 PRDM13Q9H4Q3 707 aa9.02□□□□□ -0.97
SNRNP200-201ENST00000323853 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 TMEM200BQ69YZ2 307 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 MRAP2Q96G30 205 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 PEMTQ9UBM1 199 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 SRRM5B3KS81 715 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 TIMM23O14925 209 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 IGKV1-5P01602 117 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 TIMP3P35625 211 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 LYNX1G3V0Z9 82 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 MLNRO43193 412 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 IL18BPO95998 194 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 IGHV3-11P01762 117 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 LINC00614P0C842 121 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 STAG3L3P0CL85 134 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 LYNX1P0DP58 116 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 GLRX5Q86SX6 157 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 AGMATQ9BSE5 352 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 SCN2AQ99250 2005 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 IGHV2-26A0A0B4J1V2 119 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 SPAG17Q6Q759 2223 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 H3BRM9 83 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 TMEM50AO95807 157 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 OR5AN1Q8NGI8 311 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 CSRP1P21291 193 aaKnown RBP9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 CD24P25063 80 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 NIT1Q86X76 327 aa9.01□□□□□ -0.97
SNRNP200-201ENST00000323853 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9□□□□□ -0.97
SNRNP200-201ENST00000323853 VDAC2P45880 294 aaPredicted RBP9□□□□□ -0.97
SNRNP200-201ENST00000323853 ACTL10Q5JWF8 245 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 LHFPL4Q7Z7J7 247 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 NUDT11Q96G61 164 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 MYLKQ15746 1914 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 TDRD6O60522 2096 aaKnown RBP9□□□□□ -0.97
SNRNP200-201ENST00000323853 PSMB11A5LHX3 300 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 TTC32Q5I0X7 151 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 NUP37Q8NFH4 326 aa9□□□□□ -0.97
SNRNP200-201ENST00000323853 LINC01587Q99440 93 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms