RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 BEND2Q8NDZ0 799 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 TRBV9A0A0B4J1U6 114 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 TSTD3H0UI37 97 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 RPL27AP46776 148 aaKnown RBP17.98■□□□□ 0.47
PNKP-201ENST00000322344 TAS2R60P59551 318 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 FAM209BQ5JX69 171 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 MUC15Q8N387 334 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 RITA1Q96K30 269 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 PAXXQ9BUH6 204 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 CLEC7AQ9BXN2 247 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 ZNF355PQ9NSJ1 428 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 MGAQ8IWI9 3026 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 TRAV5A0A0B4J249 113 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 IGLC7A0M8Q6 106 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 ISLRO14498 428 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 PLAUP00749 431 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 CRYGCP07315 174 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 CRYGBP07316 175 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 ADMP35318 185 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 CA7P43166 264 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 OR5I1Q13606 314 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 C9orf152Q5JTZ5 239 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 ZNF841Q6ZN19 808 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 C22orf15Q8WYQ4 148 aa17.98■□□□□ 0.47
PNKP-201ENST00000322344 GATCO43716 136 aaKnown RBP17.97■□□□□ 0.47
PNKP-201ENST00000322344 MORN5Q5VZ52 161 aa17.97■□□□□ 0.47
PNKP-201ENST00000322344 LINC01560Q8TB33 94 aa17.97■□□□□ 0.47
PNKP-201ENST00000322344 IGF2BP2-AS1Q96M15 143 aa17.97■□□□□ 0.47
PNKP-201ENST00000322344 IGHV3-72A0A0B4J1Y9 119 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 PATE2Q6UY27 113 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 OR1L6Q8NGR2 347 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 AMMECR1Q9Y4X0 333 aaPredicted RBP17.96■□□□□ 0.47
PNKP-201ENST00000322344 INSIG2Q9Y5U4 225 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 BUB1B-PAK6H3BSN5 160 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 CORTO00230 105 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 PAX2Q02962 417 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 COX19Q49B96 90 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 STXBP6Q8NFX7 210 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 CDC42EP3Q9UKI2 254 aa17.96■□□□□ 0.47
PNKP-201ENST00000322344 GVINP1Q7Z2Y8 2422 aa17.96■□□□□ 0.46
PNKP-201ENST00000322344 CEP250Q9BV73 2442 aa17.95■□□□□ 0.46
PNKP-201ENST00000322344 ANKRD11Q6UB99 2663 aaPredicted RBP17.95■□□□□ 0.46
PNKP-201ENST00000322344 IGHV1-3A0A0C4DH29 117 aa17.95■□□□□ 0.46
PNKP-201ENST00000322344 DEFA6Q01524 100 aa17.95■□□□□ 0.46
PNKP-201ENST00000322344 TNXAQ16473 311 aa17.95■□□□□ 0.46
PNKP-201ENST00000322344 TRGV9Q99603 122 aa17.95■□□□□ 0.46
PNKP-201ENST00000322344 MRPL18Q9H0U6 180 aaKnown RBP17.95■□□□□ 0.46
PNKP-201ENST00000322344 FAM90A27PA6NNH2 459 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 IGLV2-8P01709 118 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 REG1AP05451 166 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 CBLN1P23435 193 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 C8orf46Q8TAG6 207 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 PERPQ96FX8 193 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 TNFRSF19Q9NS68 423 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 MRPL36Q9P0J6 103 aaKnown RBP17.94■□□□□ 0.46
PNKP-201ENST00000322344 SIGLEC9Q9Y336 463 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 MSRB2Q9Y3D2 182 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 COMPP49747 757 aaPredicted RBP17.94■□□□□ 0.46
PNKP-201ENST00000322344 ZNF672Q499Z4 452 aaPredicted RBP17.94■□□□□ 0.46
PNKP-201ENST00000322344 GNB1LQ9BYB4 327 aa17.94■□□□□ 0.46
PNKP-201ENST00000322344 ACACAQ13085 2346 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 PPIAL4CA0A0B4J2A2 164 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 LYNX1G3V0Z9 82 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 PPIAL4GP0DN37 164 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 LYNX1P0DP58 116 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 UCNP55089 124 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 WDR73Q6P4I2 378 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 OR8I2Q8N0Y5 310 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 MISP3Q96FF7 219 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 RNF5Q99942 180 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 MT-ND6P03923 174 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 PYYP10082 97 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 CX3CL1P78423 397 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 TMEM116Q8NCL8 245 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 FXYD5Q96DB9 178 aa17.93■□□□□ 0.46
PNKP-201ENST00000322344 IGHV3-48P01763 117 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 IBA57Q5T440 356 aaKnown RBP17.92■□□□□ 0.46
PNKP-201ENST00000322344 HCP5Q6MZN7 132 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 LINC00305Q7Z4B0 112 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 ZNF329Q86UD4 541 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 LURAP1LQ8IV03 231 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 OR8B3Q8NGG8 313 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 OR8B2Q96RD0 313 aa17.92■□□□□ 0.46
PNKP-201ENST00000322344 RNASE7Q9H1E1 156 aaKnown RBP17.92■□□□□ 0.46
PNKP-201ENST00000322344 C22orf46C9J442 243 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 FCN1O00602 326 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 IER3P46695 156 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 PPP1R27Q86WC6 154 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 RPEQ96AT9 228 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 ARFGEF3Q5TH69 2177 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 SNURFLB1AK76 121 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 MGST1P10620 155 aaKnown RBP17.91■□□□□ 0.46
PNKP-201ENST00000322344 CRISP2P16562 243 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 DDTP30046 118 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 MFAP2P55001 183 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 IQCJQ1A5X6 159 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 TMEM256Q8N2U0 113 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 APC2O95996 2303 aa17.91■□□□□ 0.46
PNKP-201ENST00000322344 BSNQ9UPA5 3926 aa17.9■□□□□ 0.46
PNKP-201ENST00000322344 CCL21O00585 134 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms