RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SMPXQ9UHP9 88 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 HIST1H2BLQ99880 126 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 PLXNB1O43157 2135 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 SFTA2Q6UW10 78 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 C21orf62Q9NYP8 219 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 HEPN1Q6WQI6 88 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 F2Z2F3 143 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 FOXH1O75593 365 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 OVOL2Q9BRP0 275 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 FHL5Q5TD97 284 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 SLC22A18ASQ8N1D0 253 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 RLFQ13129 1914 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 LAGE3Q14657 143 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 C18orf12Q96KH6 178 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 MRPL52Q86TS9 123 aaKnown RBP14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 ESDP10768 282 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 FAM90A1Q86YD7 464 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 OSTCQ9NRP0 149 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 PILRBQ9UKJ0 227 aa14.23□□□□□ -0.13
SMCHD1-201ENST00000320876 TANC2Q9HCD6 1990 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 ATRXP46100 2492 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 LINC01590Q5TEZ4 76 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 RTN4RL2Q86UN3 420 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 HS3ST3B1Q9Y662 390 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 SIP14410 1827 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 MUC21A0A0G2JKD1 596 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 MUC21A0A140T8X8 626 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 TBX6O95947 436 aaPredicted RBP14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 CELA2AP08217 269 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 TMPRSS3P57727 454 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 MUC21Q5SSG8 566 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 IGKV1D-42A0A075B6H8 117 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 TRAV8-1A0A0A6YYK1 113 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 TMEM249Q2WGJ8 235 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 Q6ZT83 130 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 ZNRF1Q8ND25 227 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 MSGN1A6NI15 193 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 WBP1LQ9NX94 342 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 PLXNA3P51805 1871 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 TRAV2A0A0B4J234 112 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 IGHV3-66A0A0C4DH42 116 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 KBTBD11-OT1A0A1B0GTJ5 212 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 MIR17HGQ75NE6 70 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 PLPPR1Q8TBJ4 325 aa14.22□□□□□ -0.13
SMCHD1-201ENST00000320876 TMEM155Q4W5P6 130 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 WFDC6Q9BQY6 131 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 FBXL7Q9UJT9 491 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 ATXN7O15265 892 aaPredicted RBP14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 ATRAIDQ6UW56 229 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 SMRP1Q8NCR6 262 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 ITLN2Q8WWU7 325 aaPredicted RBP14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 LOXL4Q96JB6 756 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 CFHR5Q9BXR6 569 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 HAX1O00165 279 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 EGR4Q05215 589 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 MORN3Q6PF18 240 aaPredicted RBP14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 FABP5P3A8MUU1 101 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 RASL11AQ6T310 242 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 SPRED2Q7Z698 418 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 BRWD3Q6RI45 1802 aa14.21□□□□□ -0.13
SMCHD1-201ENST00000320876 NRN1LQ496H8 165 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 NR2C2APQ86WQ0 139 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 LINC01587Q99440 93 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 KLF4O43474 513 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 IGKV1D-33P01593 117 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 IGKV1-33P01594 117 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 CD7P09564 240 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 PDLIM4P50479 330 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 S100A7L2Q5SY68 101 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 TICRRQ7Z2Z1 1910 aa14.21□□□□□ -0.14
SMCHD1-201ENST00000320876 ATP5J2P56134 94 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 TRGV2A0A075B6R0 118 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 LOC101059948A0A1B0GTJ6 334 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 NRXN2Q9P2S2 1712 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 DLX4Q92988 240 aaPredicted RBP14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 ERG28Q9UKR5 140 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 RNF222A6NCQ9 220 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 TNFSF13O75888 250 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 ZNF525Q8N782 197 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 SLC50A1Q9BRV3 221 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 IGHV3-23P01764 117 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 MYOD1P15172 320 aa14.2□□□□□ -0.14
SMCHD1-201ENST00000320876 FAM90A9PA6NNJ1 464 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 C15orf61A6NNL5 157 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 JMJD8Q96S16 334 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 F8VVB4 439 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 F8VWA3 439 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 FRMPD3Q5JV73 1810 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 COX6A1P12074 109 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 LURAP1LQ8IV03 231 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 FAM89BQ8N5H3 189 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 IGHV3OR16-13A0A075B7E8 117 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 IGHV3-74A0A0B4J1X5 117 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 TRAV5A0A0B4J249 113 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 IGHV3-35A0A0C4DH35 117 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 C17orf98A8MV24 154 aa14.19□□□□□ -0.14
SMCHD1-201ENST00000320876 CTHRC1Q96CG8 243 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms