RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 OR1L6Q8NGR2 347 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 ARPC1AQ92747 370 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 FOXA2Q9Y261 457 aaPredicted RBP7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 PGPA6NDG6 321 aa7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 NTF3P20783 257 aa7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 DIAPH2-AS1Q14236 149 aa7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 SLC25A33Q9BSK2 321 aa7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 BET1LQ9NYM9 111 aa7.59□□□□□ -1.2
TMEM39A-201ENST00000319172 VCANP13611 3396 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 BUB1B-PAK6H3BSN5 160 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 FGF16O43320 207 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 CRYBB3P26998 211 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 TMEM14EPQ6UXP3 125 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 MAPK1IP1LQ8NDC0 245 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 OR51G1Q8NGK1 321 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 TNFRSF14Q92956 283 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 SMDT1Q9H4I9 107 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 GCHFRP30047 84 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 MLANAQ16655 118 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 KLF17Q5JT82 389 aaPredicted RBP7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 MIR17HGQ75NE6 70 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 TMEM144Q7Z5S9 345 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 LHFPL4Q7Z7J7 247 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 TMEM219Q86XT9 240 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 GATAD1Q8WUU5 269 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 GGACTQ9BVM4 153 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 WDR83OSQ9Y284 106 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 CBY3A6NI87 242 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 CAMPP49913 170 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 RNF212Q495C1 297 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 NHLRC2Q8NBF2 726 aa7.58□□□□□ -1.2
TMEM39A-201ENST00000319172 LOC102723971A0A1B0GUV8 181 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 LHBP01229 141 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 COMPP49747 757 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 TPTE2P1Q5T6R2 138 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 RBPMS2Q6ZRY4 209 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 PARLQ9H300 379 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 GAR1Q9NY12 217 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 KIAA1549Q9HCM3 1950 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 CD69Q07108 199 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 PRSS8Q16651 343 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 SP5Q6BEB4 398 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 TEX45Q8NA69 505 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 OR51M1Q9H341 326 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 ABCA12Q86UK0 2595 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 C15orf62A8K5M9 175 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 ZNF207O43670 478 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 LYL1P12980 280 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 SNRPEP62304 92 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 SORL1Q92673 2214 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 PF4P02776 101 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 ATP5G3P48201 142 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 Q6ZPA2 131 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 BPIFA4PQ86YQ2 179 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 CACNG8Q8WXS5 425 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 NAT8BQ9UHF3 227 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 TRAPPC1Q9Y5R8 145 aa7.57□□□□□ -1.2
TMEM39A-201ENST00000319172 GPR183P32249 361 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 PAX9P55771 341 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 BATFQ16520 125 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 ZNF506Q5JVG8 444 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 KIR3DL3Q8N743 410 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 CLDND2Q8NHS1 167 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 IGFBPL1Q8WX77 278 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 AGMATQ9BSE5 352 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 FUT9Q9Y231 359 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 COL5A1P20908 1838 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 FAM90A9PA6NNJ1 464 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 RAB5AP20339 215 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 TPPP2P59282 170 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 LEMD1Q68G75 181 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 RPP25LQ8N5L8 163 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 SGMS2Q8NHU3 365 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 TMEM167AQ8TBQ9 72 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 RNASEH2CQ8TDP1 164 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 C21orf62Q9NYP8 219 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 POLQO75417 2590 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 TMSB15BA0A087X1C1 80 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 IGHV3-66A0A0C4DH42 116 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 C20orf202A1L168 122 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 C22orf46C9J442 243 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 TRGV3P03979 118 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 SRP19P09132 144 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 STAG3L3P0CL85 134 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 PRTN3P24158 256 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 CNTFRP26992 372 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 ZNF137PP52743 207 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms