RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 THYN1Q9P016 225 aa11.98□□□□□ -0.49
PDLIM5-202ENST00000318007 CLPSL1A2RUU4 121 aa11.97□□□□□ -0.49
PDLIM5-202ENST00000318007 Q56UQ5 140 aa11.97□□□□□ -0.49
PDLIM5-202ENST00000318007 CLEC19AQ6UXS0 136 aa11.97□□□□□ -0.49
PDLIM5-202ENST00000318007 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
PDLIM5-202ENST00000318007 RNASEH2CQ8TDP1 164 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-202ENST00000318007 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
PDLIM5-202ENST00000318007 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 CYB5BO43169 146 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 NDUFA7O95182 113 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 TRBV12-3P01733 135 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 S100A11P31949 105 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 GPR183P32249 361 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 BAXQ07812 192 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 NECAP1Q8NC96 275 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 OR4X2Q8NGF9 303 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 GNB4Q9HAV0 340 aa11.96□□□□□ -0.49
PDLIM5-202ENST00000318007 PPP5D1E7EU14 171 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 CORTO00230 105 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 LY86O95711 162 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 ATP5G2Q06055 141 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 OR2F1Q13607 317 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 EXOSC2Q13868 293 aaKnown RBP11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 RPL7L1Q6DKI1 246 aaKnown RBP11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 SLC35E1Q96K37 410 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 DUX3Q96PT4 197 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 C21orf62Q9NYP8 219 aa11.96□□□□□ -0.5
PDLIM5-202ENST00000318007 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 PROK1P58294 105 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 KRTAP10-3P60369 221 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 RUNX1Q01196 453 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 KCNRGQ8N5I3 272 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 HSD17B11Q8NBQ5 300 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 OR1L6Q8NGR2 347 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 ATP5SQ99766 215 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 CITED2Q99967 270 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 SLA2Q9H6Q3 261 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 UQCC1Q9NVA1 299 aa11.95□□□□□ -0.5
PDLIM5-202ENST00000318007 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 KANTRA0A1W2PQU2 76 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 HIST1H1BP16401 226 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 GATA2P23769 480 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF345Q14585 488 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 ZFP92A6NM28 416 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 GNG7O60262 68 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 CLEC3BP05452 202 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 FGF7P21781 194 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF90Q03938 601 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 FOXE3Q13461 319 aa11.94□□□□□ -0.5
PDLIM5-202ENST00000318007 A0A0D9SG52 128 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 TCRBV4S1A1TA0A5B7 111 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 F8W735 103 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 EEF1AKMT3Q96AZ1 226 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 RSG1Q9BU20 258 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF580Q9UK33 172 aa11.93□□□□□ -0.5
PDLIM5-202ENST00000318007 NUDT19A8MXV4 375 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 BCL2L11O43521 198 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 ELANEP08246 267 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 OPCMLQ14982 345 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 NSUN5P1Q3KNT7 163 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 ETFRF1Q6IPR1 90 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 CXorf58Q96LI9 332 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 SH3BGRL3Q9H299 93 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 H3BUA1 57 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 MFAP4P55083 255 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 ATP5IP56385 69 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 DLK1P80370 383 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 FOXL1Q12952 345 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 KIAA0141Q14154 515 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 TIGITQ495A1 244 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 BTNL8Q6UX41 500 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 CHRDL1Q9BU40 450 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 NPVFQ9HCQ7 196 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 CYTL1Q9NRR1 136 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 COL6A5A8TX70 2615 aa11.92□□□□□ -0.5
PDLIM5-202ENST00000318007 OR10J1P30954 320 aa11.91□□□□□ -0.5
PDLIM5-202ENST00000318007 GPX4P36969 197 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-202ENST00000318007 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-202ENST00000318007 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
PDLIM5-202ENST00000318007 A0A0G2JLM5 398 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 IFNA5P01569 189 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 TEPPQ6URK8 271 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 WIPF2Q8TF74 440 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 WFDC12Q8WWY7 111 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms