RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 C17orf58Q2M2W7 97 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 PIP4P2Q8N4L2 257 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 TMA7Q9Y2S6 64 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 WNT10AQ9GZT5 417 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 TNRC6AQ8NDV7 1962 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 KIAA1549Q9HCM3 1950 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 HERVK_113P61574 105 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 PAX8Q06710 450 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 PQLC2Q6ZP29 291 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 LCNL1Q6ZST4 164 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 COL27A1Q8IZC6 1860 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 CA2P00918 260 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 SELLP14151 372 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 HTN3P15516 51 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF833PQ6ZTB9 187 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 OR5AU1Q8NGC0 362 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 OR5AN1Q8NGI8 311 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 IL17DQ8TAD2 202 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 FAM110DQ8TAY7 271 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 LINC01619G3V211 115 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 GUK1Q16774 197 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 SAPCD1Q5SSQ6 148 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 SIGLECL1Q8N7X8 197 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 NABP2Q9BQ15 211 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 PHLDA3Q9Y5J5 127 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 MSGN1A6NI15 193 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 DANCRP0C864 163 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 TRGC1P0CF51 173 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 PUSL1Q8N0Z8 303 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF581Q9P0T4 197 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 TRGV2A0A075B6R0 118 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 PLA2G2AP14555 144 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 RPS10P46783 165 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 CX3CL1P78423 397 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 AANATQ16613 207 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 FAM74A3Q4VXF1 159 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 PRSS57Q6UWY2 283 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM101Q96IK0 257 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 VGLL1Q99990 258 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 CENPFP49454 3210 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 A0A087X0M5 115 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 A0A1B0GX30 115 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 REG1AP05451 166 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 NMBP08949 121 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 NHLH2Q02577 135 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 MSMPQ1L6U9 139 aa6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 SRSF12Q8WXF0 261 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-201ENST00000317968 G3V3Q6 166 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 SAA4P35542 130 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 PRNTQ86SH4 94 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 GATAD1Q8WUU5 269 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 BUB1B-PAK6H3BSN5 160 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 IGKV1-5P01602 117 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 AMBPP02760 352 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 NECAP1Q8NC96 275 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM116Q8NCL8 245 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 IGHV1-3A0A0C4DH29 117 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 CGB3P0DN86 165 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 CGB7P0DN87 165 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 PNRC1Q12796 327 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 IL15RAQ13261 267 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 C2orf83Q53S99 150 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 Q5BKY6 102 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 LYPD2Q6UXB3 125 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM14EPQ6UXP3 125 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 KCNS1Q96KK3 526 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 H0YIZ8 118 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 H0YJW9 148 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 SAA1P0DJI8 122 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 TSSC4Q9Y5U2 329 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 ARHGAP21Q5T5U3 1957 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF585BQ52M93 769 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 SLC7A5P1Q8MH63 180 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 SLC35B3Q9H1N7 401 aa6.97□□□□□ -1.29
PDLIM5-201ENST00000317968 TRGV11A0A075B6L2 103 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 CYP2G1PQ6ZSU1 146 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM144Q7Z5S9 345 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 FAM210BQ96KR6 192 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 NRN1Q9NPD7 142 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM262E9PQX1 116 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 SCO1O75880 301 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 SOD3P08294 240 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM241Q24JQ0 296 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 AGMATQ9BSE5 352 aa6.96□□□□□ -1.29
PDLIM5-201ENST00000317968 SPTBN4Q9H254 2564 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 CBY3A6NI87 242 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 C8orf88P0DMB2 117 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 ZNF383Q8NA42 475 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 OR1N2Q8NGR9 330 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 SHANK1Q9Y566 2161 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 PGPA6NDG6 321 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 GRNP28799 593 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 IFITM2Q01629 132 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 RSG1Q9BU20 258 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 LIME1Q9H400 295 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 VAX2Q9UIW0 290 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms