RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PEF1Q9UBV8 284 aaKnown RBP6.26□□□□□ -1.41
CDHR3-201ENST00000317716 S4R3C0 116 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 YLPM1P49750 1951 aaKnown RBP6.26□□□□□ -1.41
CDHR3-201ENST00000317716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.26□□□□□ -1.41
CDHR3-201ENST00000317716 TRGV5A0A0B4J1U4 118 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 IGHV3-35A0A0C4DH35 117 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 KIR2DL5BA0A0G2JN68 375 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 KIR2DL5BA0A0G2JPC4 375 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 GAGE12BA1L429 117 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 NKX6-3A6NJ46 265 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 LINC00473A8K010 186 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 TGFAP01135 160 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 CTSSP25774 331 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 KIR2DL5AQ8N109 375 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 ADTRPQ96IZ2 230 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 PRDM14Q9GZV8 571 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 GP6Q9HCN6 339 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A18PA6NE21 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A16PA6NEW6 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A20PA6NIJ5 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A8PA6NJQ4 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A7PA6NKC0 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A22PA8MWA6 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 A8MWL6 223 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A12PA8MX19 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A5PA8MXJ8 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A23PA8MXZ1 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 MPDU1O75352 247 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A15PP0C7V4 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A13PP0C7W8 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A14PP0C7W9 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM90A24PP0C7X0 464 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FABP2P12104 132 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 IGLL1P15814 213 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 PTGDSP41222 190 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 COX19Q49B96 90 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 DNLZQ5SXM8 178 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 C5orf17Q8NAS9 161 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 NUDT10Q8NFP7 164 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 MGST2Q99735 147 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 SPCS1Q9Y6A9 102 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FAM181BA6NEQ2 426 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 H3BVH4 76 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 APOHP02749 345 aaPredicted RBP6.25□□□□□ -1.41
CDHR3-201ENST00000317716 TYMSP04818 313 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FER1L6-AS2Q96M78 137 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 CCL13Q99616 98 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 DYNLRB1Q9NP97 96 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 LRRK2Q5S007 2527 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 IGHV1-45A0A0A0MS14 117 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 C9orf172C9J069 976 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 K7EQM0 130 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 HSPE1P61604 102 aaKnown RBP6.25□□□□□ -1.41
CDHR3-201ENST00000317716 SELENOTP62341 195 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 TBR1Q16650 682 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 OCIAD2Q56VL3 154 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 GOLT1AQ6ZVE7 132 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 ZBTB34Q8NCN2 500 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 C1QTNF5Q9BXJ0 243 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 KLK15Q9H2R5 256 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 RAXQ9Y2V3 346 aa6.25□□□□□ -1.41
CDHR3-201ENST00000317716 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
CDHR3-201ENST00000317716 COX7A1P24310 79 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 ACP1P24666 158 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 GPR183P32249 361 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 OR10W1Q8NGF6 305 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 WFDC12Q8WWY7 111 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 SMIM12Q96EX1 92 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 ZPBPQ9BS86 351 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 CXXC4Q9H2H0 198 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 AP5S1Q9NUS5 200 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 UFC1Q9Y3C8 167 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 TRAV8-6A0A0B4J262 113 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 A0A1W2PRE2 83 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 C15orf62A8K5M9 175 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 SAP30O75446 220 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 CYC1P08574 325 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 STAG3L2P0CL84 134 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 STAG3L3P0CL85 134 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 COX6A1P12074 109 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 MPV17P39210 176 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 SLAQ13239 276 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 CCL17Q92583 94 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 YPEL4Q96NS1 127 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 RAB9BQ9NP90 201 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 TRBV20OR9-2A0A075B6H5 130 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 LOC107984156A0A0G2JMH3 177 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 SCGB1C2P0DMR2 95 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 LGALS4P56470 323 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 HBBP68871 147 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 FOXF2Q12947 444 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 C10orf55Q5SWW7 151 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 SAMD13Q5VXD3 122 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 ARL17AQ8IVW1 177 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 KLF14Q8TD94 323 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms