RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ZFP36L2P47974 494 aaKnown RBP7.39□□□□□ -1.23
USF3-201ENST00000316407 CD300EQ496F6 205 aaPredicted RBP7.39□□□□□ -1.23
USF3-201ENST00000316407 HEXA-AS1Q9H8Q6 139 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 SEPSECSQ9HD40 501 aaKnown RBP7.39□□□□□ -1.23
USF3-201ENST00000316407 TRAV8-3A0A0A6YYJ7 113 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 ZXDCQ2QGD7 858 aaPredicted RBP7.39□□□□□ -1.23
USF3-201ENST00000316407 SF3B6Q9Y3B4 125 aaKnown RBP7.39□□□□□ -1.23
USF3-201ENST00000316407 ACTL10Q5JWF8 245 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 SS18L2Q9UHA2 77 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 IGHV1-69-2A0A0G2JMI3 117 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 FAM90A26D6RGX4 464 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 REPIN1Q9BWE0 567 aaKnown RBP7.39□□□□□ -1.23
USF3-201ENST00000316407 C17orf98A8MV24 154 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 CRYBA2P53672 197 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 C1orf194Q5T5A4 169 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 FAM181AQ8N9Y4 354 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 MS4A6AQ9H2W1 248 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 ADAMTSL3P82987 1691 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 CELA2AP08217 269 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 ZNF664Q8N3J9 261 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 FBXL15Q9H469 300 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 C2CD4DB7Z1M9 353 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 CCDC144NLQ6NUI1 221 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 DENND4CQ5VZ89 1909 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 TRAV17A0A0B4J275 112 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 CA11O75493 328 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 FAM106CPP0CH98 169 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 PLA2G2FQ9BZM2 168 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 ATP5G2Q06055 141 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 FAM27BQ5VT28 67 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 PRR7Q8TB68 274 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 SF3B5Q9BWJ5 86 aaKnown RBP7.38□□□□□ -1.23
USF3-201ENST00000316407 A0A1W2PQD3 144 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 GPBAR1Q8TDU6 330 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 C2orf16Q68DN1 1984 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 TDGF1P13385 188 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 AZU1P20160 251 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 GLRXP35754 106 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 BMPERQ8N8U9 685 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 TEX45Q8NA69 505 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 BHLHA9Q7RTU4 235 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 DUX3Q96PT4 197 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
USF3-201ENST00000316407 IGKV1-8A0A0C4DH67 115 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 TSPAN7P41732 249 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 EGR4Q05215 589 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 ZNF658BQ4V348 819 aaPredicted RBP7.37□□□□□ -1.23
USF3-201ENST00000316407 CIARTQ8N365 385 aaPredicted RBP7.37□□□□□ -1.23
USF3-201ENST00000316407 ITLN1Q8WWA0 313 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 AHDC1Q5TGY3 1603 aaPredicted RBP7.37□□□□□ -1.23
USF3-201ENST00000316407 ZNRF1Q8ND25 227 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 KCNK17Q96T54 332 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 VSIRQ9H7M9 311 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 RPP25Q9BUL9 199 aaKnown RBP7.37□□□□□ -1.23
USF3-201ENST00000316407 RFNGQ9Y644 331 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 CRPP02741 224 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 SPG11Q96JI7 2443 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 STARD6P59095 220 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 LY6G6FQ5SQ64 297 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 C1orf100Q5SVJ3 147 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 SPEM1Q8N4L4 309 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 CD28P10747 220 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 HAPLN4Q86UW8 402 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 A0A1W2PS18 150 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 TEX38Q6PEX7 206 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 ANAPC1Q9H1A4 1944 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 PYYP10082 97 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
USF3-201ENST00000316407 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 OR13A1Q8NGR1 328 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 NABP1Q96AH0 204 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 C9JAW5 83 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 SRSF1Q07955 248 aaKnown RBP eCLIP7.36□□□□□ -1.23
USF3-201ENST00000316407 IFI27L1Q96BM0 104 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 HS3ST3B1Q9Y662 390 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 TNRC6BQ9UPQ9 1833 aaKnown RBP7.36□□□□□ -1.23
USF3-201ENST00000316407 DRD3P35462 400 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 TMPRSS3P57727 454 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 C9orf50Q5SZB4 431 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 TMEM42Q69YG0 159 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 CLEC2AQ6UVW9 174 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 TMEM92Q6UXU6 159 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 HAX1O00165 279 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 DXOO77932 396 aaKnown RBP7.36□□□□□ -1.23
USF3-201ENST00000316407 A8MWP6 167 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 D6R8Y8 96 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 ZNF138P52744 262 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 TTTY12Q9BZ98 90 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 TRAV9-1A0A075B6T8 112 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 OR9G4Q8NGQ1 327 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 OCC1Q8TAD7 63 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 IGLV1-36A0A0B4J1U3 117 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
USF3-201ENST00000316407 TIMP3P35625 211 aa7.36□□□□□ -1.23
USF3-201ENST00000316407 LAGE3Q14657 143 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms