RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF90Q03938 601 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 MSMO1Q15800 293 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 C10orf55Q5SWW7 151 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 OR4A47Q6IF82 309 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 ONECUT1Q9UBC0 465 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 HSPB7Q9UBY9 170 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 YTHDF2Q9Y5A9 579 aaKnown RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 C15orf62A8K5M9 175 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 E7EUB6 86 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM250H0YL14 139 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 M0R143 59 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 MBP02144 154 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 PAX1P15863 534 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 PMCHP20382 165 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 LGALS4P56470 323 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 ERVK-16P61578 105 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 C19orf35Q6ZS72 473 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 BAGE3Q86Y29 109 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 BAGE2Q86Y30 109 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 PNKDQ8N490 385 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 SFRP2Q96HF1 295 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 SAMD10Q9BYL1 202 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
TRIM55-202ENST00000315962 LINC00312Q9Y6C7 94 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 K7EN84 100 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 ERVFC1-1P60608 527 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 CR1LQ2VPA4 569 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 TRAT1Q6PIZ9 186 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 LHFPL4Q7Z7J7 247 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 Q8N7P7 452 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 NRGNQ92686 78 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 ACY3Q96HD9 319 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM208Q9BTX3 173 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 TLN2Q9Y4G6 2542 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 CCDC168Q8NDH2 2452 aa6.17□□□□□ -1.42
TRIM55-202ENST00000315962 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 REG1AP05451 166 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 CNTFRP26992 372 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 CD1BP29016 333 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 ACOT6Q3I5F7 207 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 PDLIM3Q53GG5 364 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 MRPL54Q6P161 138 aaKnown RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 OR8I2Q8N0Y5 310 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 ZBTB34Q8NCN2 500 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 ZNF439Q8NDP4 499 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 BTF3L4Q96K17 158 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 RNASE7Q9H1E1 156 aaKnown RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 GAL3ST2Q9H3Q3 398 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 SLC35D1Q9NTN3 355 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 HILPDAQ9Y5L2 63 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 SNURFLB1AK76 121 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 FCN1O00602 326 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 TGOLN2O43493 480 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 OR10J4P0C629 311 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 P0C879 139 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 RELBQ01201 579 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 KLRD1Q13241 179 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 LBHQ53QV2 105 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 SLC25A48Q6ZT89 311 aaKnown RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 C11orf42Q8N5U0 333 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 FAM216AQ8WUB2 273 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 ITLN2Q8WWU7 325 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 RCHY1Q96PM5 261 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
TRIM55-202ENST00000315962 PXMP4Q9Y6I8 212 aa6.16□□□□□ -1.42
TRIM55-202ENST00000315962 IGHV3-21A0A0B4J1V1 117 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 NTF3P20783 257 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 PDLIM4P50479 330 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 COA6Q5JTJ3 125 aaKnown RBP6.15□□□□□ -1.42
TRIM55-202ENST00000315962 DMRTA1Q5VZB9 504 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 OR1L6Q8NGR2 347 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 DDB2Q92466 427 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 SGK494Q96LW2 274 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 HARBI1Q96MB7 349 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 UHRF2Q96PU4 802 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 MGST2Q99735 147 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 PPIAL4CA0A0B4J2A2 164 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 C22orf46C9J442 243 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 SAA1P0DJI8 122 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-202ENST00000315962 PPIAL4GP0DN37 164 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 IGHV1-8P0DP01 117 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 CRISP2P16562 243 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 RAB7AP51149 207 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 ARSJQ5FYB0 599 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-202ENST00000315962 C1orf194Q5T5A4 169 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 TREML4Q6UXN2 200 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 OR4P4Q8NGL7 312 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 OR10G8Q8NGN5 311 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 OR4S2Q8NH73 311 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 BBC3Q96PG8 261 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-202ENST00000315962 FBXL7Q9UJT9 491 aa6.15□□□□□ -1.42
TRIM55-202ENST00000315962 A1L4Q6 167 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 J3QR06 171 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 SLC25A17O43808 307 aa6.15□□□□□ -1.43
TRIM55-202ENST00000315962 SRP14P37108 136 aaKnown RBP6.15□□□□□ -1.43
TRIM55-202ENST00000315962 MMDQ15546 238 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms