RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF414Q96IQ9 312 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 ATXN7O15265 892 aaPredicted RBP11.43□□□□□ -0.58
SPAST-201ENST00000315285 SELLP14151 372 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 TMEM14EPQ6UXP3 125 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
SPAST-201ENST00000315285 PMCHL2Q9BQD1 86 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 NRN1Q9NPD7 142 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 E9PLN8 166 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 LRRK1Q38SD2 2015 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 PKDREJQ9NTG1 2253 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 TRGV3P03979 118 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 GPR183P32249 361 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
SPAST-201ENST00000315285 PRB3Q04118 309 aaPredicted RBP11.42□□□□□ -0.58
SPAST-201ENST00000315285 HIST1H2BLQ99880 126 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 PRDM13Q9H4Q3 707 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 RPUSD1Q9UJJ7 312 aaKnown RBP11.42□□□□□ -0.58
SPAST-201ENST00000315285 PLXNA4Q9HCM2 1894 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 IGHV3OR16-8A0A075B7F1 116 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 Q6ZS49 121 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 C1QL4Q86Z23 238 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 HEATR1Q9H583 2144 aaKnown RBP11.42□□□□□ -0.58
SPAST-201ENST00000315285 IGHV3-66A0A0C4DH42 116 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 MUC21Q5SSG8 566 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 Q6AWC8 147 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 FANCMQ8IYD8 2048 aa11.42□□□□□ -0.58
SPAST-201ENST00000315285 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 GFRA3O60609 400 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 IGKV3-15P01624 115 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 NBR2O15453 112 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 AREGP15514 252 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 Q6P435 159 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 C18orf15Q96N68 181 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 NDUFAF3Q9BU61 184 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 A0A1B0GW15 77 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 WISP1O95388 367 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
SPAST-201ENST00000315285 LEMD1Q68G75 181 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 HIST3H2BBQ8N257 126 aa11.41□□□□□ -0.58
SPAST-201ENST00000315285 ETV2O00321 342 aaPredicted RBP11.4□□□□□ -0.58
SPAST-201ENST00000315285 ADCYAP1P18509 176 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 PLP1P60201 277 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 GFI1BQ5VTD9 330 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 CD177Q8N6Q3 437 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 CHODLQ9H9P2 273 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 MYO7BQ6PIF6 2116 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 ZNF600Q6ZNG1 722 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 VOPP1Q96AW1 172 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 SSBP4Q9BWG4 385 aaPredicted RBP11.4□□□□□ -0.58
SPAST-201ENST00000315285 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 ANAPC1Q9H1A4 1944 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.4□□□□□ -0.58
SPAST-201ENST00000315285 A1L4Q6 167 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 COX6B1P14854 86 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 MDS2Q8NDY4 140 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 DDB2Q92466 427 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 ZNF407Q9C0G0 2248 aa11.4□□□□□ -0.58
SPAST-201ENST00000315285 FAM74A4Q5TZK3 123 aa11.4□□□□□ -0.59
SPAST-201ENST00000315285 ERASQ7Z444 233 aa11.4□□□□□ -0.59
SPAST-201ENST00000315285 ZNF524Q96C55 264 aa11.4□□□□□ -0.59
SPAST-201ENST00000315285 TIMP3P35625 211 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 FAM159AQ6UWV7 190 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 MIEN1Q9BRT3 115 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 A0A0G2JRQ6 117 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 DOCK7Q96N67 2140 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 WNK2Q9Y3S1 2297 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 CSRP1P21291 193 aaKnown RBP11.39□□□□□ -0.59
SPAST-201ENST00000315285 TSPOP30536 169 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 PVRIGQ6DKI7 326 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
SPAST-201ENST00000315285 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
SPAST-201ENST00000315285 C1orf147Q96MC9 270 aaPredicted RBP11.39□□□□□ -0.59
SPAST-201ENST00000315285 SPTAN1Q13813 2472 aaKnown RBP11.39□□□□□ -0.59
SPAST-201ENST00000315285 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 ORMDL3Q8N138 153 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 GNB1LQ9BYB4 327 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 LYNX1G3V0Z9 82 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 H7C2G1 150 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 M0R381 172 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 LYNX1P0DP58 116 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 SMAGPQ0VAQ4 97 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms