RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ANAPC16Q96DE5 110 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 SEPSECSQ9HD40 501 aaKnown RBP10.04□□□□□ -0.8
RNF4-201ENST00000314289 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 NUPR1O60356 82 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 GNLYP22749 145 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 ST6GALNAC6Q969X2 333 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 NEIL1Q96FI4 390 aaPredicted RBP10.04□□□□□ -0.8
RNF4-201ENST00000314289 C11orf94C9JXX5 98 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 GGCTO75223 188 aaKnown RBP10.03□□□□□ -0.8
RNF4-201ENST00000314289 ERVFC1-1P60608 527 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 ARF6P62330 175 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 RPL8P62917 257 aaKnown RBP10.03□□□□□ -0.8
RNF4-201ENST00000314289 MS4A10Q96PG2 267 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 DERL1Q9BUN8 251 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 ZNF430Q9H8G1 570 aaPredicted RBP10.03□□□□□ -0.8
RNF4-201ENST00000314289 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 NAGKQ9UJ70 344 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 IGKV1OR2-108A0A075B7D4 117 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 C22orf46C9J442 243 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 CD24P25063 80 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 POU2AF1Q16633 256 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 STPG3Q8N7X2 389 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 OR4C13Q8NGP0 309 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 OSR1Q8TAX0 266 aaPredicted RBP10.03□□□□□ -0.8
RNF4-201ENST00000314289 MBP02144 154 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 IL6RP08887 468 aaPredicted RBP10.03□□□□□ -0.8
RNF4-201ENST00000314289 ARL14EPLP0DKL9 152 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
RNF4-201ENST00000314289 NPPCP23582 126 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 BATFQ16520 125 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 TEPPQ6URK8 271 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 TMEM186Q96B77 213 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 TBX15Q96SF7 602 aa10.03□□□□□ -0.8
RNF4-201ENST00000314289 FOXH1O75593 365 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 SRP14P37108 136 aaKnown RBP10.02□□□□□ -0.81
RNF4-201ENST00000314289 ATP5G3P48201 142 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 PPOXP50336 477 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 GNB1P62873 340 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 PNKDQ8N490 385 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 PRORYQ9H606 182 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 MANBALQ9NQG1 85 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 BET1LQ9NYM9 111 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 C19orf84I3L1E1 186 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 WT1-ASQ06250 92 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 TOMM20LQ6UXN7 152 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 RAB1BQ9H0U4 201 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 WASHC3Q9Y3C0 194 aa10.02□□□□□ -0.81
RNF4-201ENST00000314289 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 IGLV2-23P01705 113 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 SSBP2P81877 361 aaPredicted RBP10.01□□□□□ -0.81
RNF4-201ENST00000314289 KLRD1Q13241 179 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 C1orf194Q5T5A4 169 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 HCP5Q6MZN7 132 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 UBTD1Q9HAC8 227 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
RNF4-201ENST00000314289 FAM208BQ5VWN6 2430 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 NDUFB4O95168 129 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 RNASE2P10153 161 aaKnown RBP10.01□□□□□ -0.81
RNF4-201ENST00000314289 OPRK1P41145 380 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 TMEM177Q53S58 311 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 HILPDAQ9Y5L2 63 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 LINC01551Q86U37 167 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 SGMS2Q8NHU3 365 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 NDUFA4L2Q9NRX3 87 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 INSIG2Q9Y5U4 225 aa10.01□□□□□ -0.81
RNF4-201ENST00000314289 C21orf62-AS1Q17RA5 79 aa10□□□□□ -0.81
RNF4-201ENST00000314289 TDRG1Q3Y452 100 aa10□□□□□ -0.81
RNF4-201ENST00000314289 RUSC1-AS1Q66K80 236 aa10□□□□□ -0.81
RNF4-201ENST00000314289 LHFPL4Q7Z7J7 247 aa10□□□□□ -0.81
RNF4-201ENST00000314289 OR5B3Q8NH48 314 aa10□□□□□ -0.81
RNF4-201ENST00000314289 IMMP2LQ96T52 175 aa10□□□□□ -0.81
RNF4-201ENST00000314289 TYMSP04818 313 aa10□□□□□ -0.81
RNF4-201ENST00000314289 OR10J1P30954 320 aa10□□□□□ -0.81
RNF4-201ENST00000314289 ADMP35318 185 aa10□□□□□ -0.81
RNF4-201ENST00000314289 HLA-DRB5Q30154 266 aa10□□□□□ -0.81
RNF4-201ENST00000314289 PDPNQ86YL7 162 aa10□□□□□ -0.81
RNF4-201ENST00000314289 OR1L8Q8NGR8 309 aa10□□□□□ -0.81
RNF4-201ENST00000314289 PAM16Q9Y3D7 125 aa10□□□□□ -0.81
RNF4-201ENST00000314289 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 RAB4AP20338 218 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 RPL15P61313 204 aaKnown RBP9.99□□□□□ -0.81
RNF4-201ENST00000314289 LINC00311Q8N616 119 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 OR4P4Q8NGL7 312 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 CMTM2Q8TAZ6 248 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 RBM14Q96PK6 669 aaKnown RBP9.99□□□□□ -0.81
RNF4-201ENST00000314289 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 USP24Q9UPU5 2620 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 KIR2DL5BA0A0G2JN68 375 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 KIR2DL5BA0A0G2JPC4 375 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 MPDU1O75352 247 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms