RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 AMBPP02760 352 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 SUB1P53999 127 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 JOSD1Q15040 202 aaPredicted RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 PSG5Q15238 335 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 ZNRD1Q9P1U0 126 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 ACTL6BO94805 426 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 CCL17Q92583 94 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 IL36BQ9NZH7 164 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 TNCP24821 2201 aa11.49□□□□□ -0.57
RAB40A-201ENST00000304236 GCGP01275 180 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 MC5RP33032 325 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 ZNF137PP52743 207 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 YPEL3P61236 119 aaPredicted RBP11.48□□□□□ -0.57
RAB40A-201ENST00000304236 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 ZCCHC24Q8N2G6 241 aaKnown RBP11.48□□□□□ -0.57
RAB40A-201ENST00000304236 DYNLRB1Q9NP97 96 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 OTOGQ6ZRI0 2925 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 IGKV1OR2-108A0A075B7D4 117 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 A0A087X0M5 115 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 A0A1B0GX30 115 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
RAB40A-201ENST00000304236 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 PKIAP61925 76 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 OR9G1Q8NH87 305 aa11.48□□□□□ -0.57
RAB40A-201ENST00000304236 EAF1Q96JC9 268 aaPredicted RBP11.48□□□□□ -0.57
RAB40A-201ENST00000304236 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 HELTA6NFD8 242 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 FCN3O75636 299 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 RPL19P84098 196 aaKnown RBP11.47□□□□□ -0.57
RAB40A-201ENST00000304236 ZNF90Q03938 601 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 VMA21Q3ZAQ7 101 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 CSMD1Q96PZ7 3565 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 OR7C2O60412 319 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 LOXP28300 417 aaPredicted RBP11.47□□□□□ -0.57
RAB40A-201ENST00000304236 DLX6P56179 175 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 TMEM155Q4W5P6 130 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 LYPD2Q6UXB3 125 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 MOB3BQ86TA1 216 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 MRPL41Q8IXM3 137 aaKnown RBP11.47□□□□□ -0.57
RAB40A-201ENST00000304236 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
RAB40A-201ENST00000304236 CCDC168Q8NDH2 2452 aa11.46□□□□□ -0.57
RAB40A-201ENST00000304236 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 SHISA9B4DS77 424 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 TSTD3H0UI37 97 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 LGALS7P47929 136 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 GNG4P50150 75 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 FAM209BQ5JX69 171 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 OR1L4Q8NGR5 311 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 F8P00451 2351 aa11.46□□□□□ -0.58
RAB40A-201ENST00000304236 POLQO75417 2590 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 E7EQL1 145 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 K7EN84 100 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 IGLV2-23P01705 113 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 OR10J4P0C629 311 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 HNF1AP20823 631 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 APOBEC3AP31941 199 aaPredicted RBP11.45□□□□□ -0.58
RAB40A-201ENST00000304236 REG1BP48304 166 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 TNFRSF14Q92956 283 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 ZNF503Q96F45 646 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 TEP1Q99973 2627 aaKnown RBP11.45□□□□□ -0.58
RAB40A-201ENST00000304236 B9A039 149 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 GATA2P23769 480 aaPredicted RBP11.45□□□□□ -0.58
RAB40A-201ENST00000304236 CRYBB3P26998 211 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 SELENOTP62341 195 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 DEFA6Q01524 100 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 MLANAQ16655 118 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 RPEL1Q2QD12 228 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 TIGITQ495A1 244 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 ZNF430Q9H8G1 570 aaPredicted RBP11.45□□□□□ -0.58
RAB40A-201ENST00000304236 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
RAB40A-201ENST00000304236 DCHS2Q6V1P9 2916 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 ADGRG4Q8IZF6 3080 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 TRBV9A0A0B4J1U6 114 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 PSMB11A5LHX3 300 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 GZMBP10144 247 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 ERVFC1-1P60608 527 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 CENPWQ5EE01 88 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 C9orf152Q5JTZ5 239 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 ETFRF1Q6IPR1 90 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 GBGT1Q8N5D6 347 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 THAP8Q8NA92 274 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 OR2T6Q8NHC8 308 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 OSTCQ9NRP0 149 aa11.44□□□□□ -0.58
RAB40A-201ENST00000304236 IGHV1-69-2A0A0G2JMI3 117 aa11.43□□□□□ -0.58
RAB40A-201ENST00000304236 LGALS4P56470 323 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms