RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SAP30O75446 220 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 CEACAM8P31997 349 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-201ENST00000302528 RHOGP84095 191 aa8.71□□□□□ -1.02
CLIP1-201ENST00000302528 F5P12259 2224 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 A0A1W2PQF6 199 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 CDKN1AP38936 164 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 PLEKHB2Q96CS7 222 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 OVOL1O14753 267 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 CSRP3P50461 194 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 RPL36AP83881 106 aaKnown RBP8.7□□□□□ -1.02
CLIP1-201ENST00000302528 GAGE2AQ6NT46 116 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 RPL36ALQ969Q0 106 aaKnown RBP8.7□□□□□ -1.02
CLIP1-201ENST00000302528 RP1P56715 2156 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 A0A1W2PRS3 328 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 CECR9P0C854 216 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 CMC4P56277 68 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-201ENST00000302528 SEC11AP67812 179 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 CCL20P78556 96 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 TMEM126AQ9H061 195 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 LINC00312Q9Y6C7 94 aa8.7□□□□□ -1.02
CLIP1-201ENST00000302528 ZFC3H1O60293 1989 aaKnown RBP8.69□□□□□ -1.02
CLIP1-201ENST00000302528 A0A087WWC5 75 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 F2Z2F3 143 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 PIN1P1O15428 100 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 LAGE3Q14657 143 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 ZXDCQ2QGD7 858 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-201ENST00000302528 MRAPQ8TCY5 172 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 RPL23P62829 140 aaKnown RBP8.69□□□□□ -1.02
CLIP1-201ENST00000302528 TEX43Q6ZNM6 134 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 TMEM144Q7Z5S9 345 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 SMPXQ9UHP9 88 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 LEPROTO15243 131 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 GZMMP51124 257 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 IMMP1LQ96LU5 166 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 PTPRFP10586 1907 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 Q5BKY6 102 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 TMEM170AQ8WVE7 144 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 CARHSP1Q9Y2V2 147 aaKnown RBP8.69□□□□□ -1.02
CLIP1-201ENST00000302528 GP6Q9HCN6 339 aa8.69□□□□□ -1.02
CLIP1-201ENST00000302528 SNRNP200O75643 2136 aaKnown RBP8.68□□□□□ -1.02
CLIP1-201ENST00000302528 MYO7AQ13402 2215 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 UMODP07911 640 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
CLIP1-201ENST00000302528 NDUFAF3Q9BU61 184 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 SIGLEC15Q6ZMC9 328 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 SLC22A18ASQ8N1D0 253 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 IGHV3-53P01767 116 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 C1QTNF9P0C862 333 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 UCP1P25874 307 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-201ENST00000302528 PAX8Q06710 450 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 NUP214P35658 2090 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-201ENST00000302528 COL4A5P29400 1685 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 UPK2O00526 184 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 PYYP10082 97 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 SPRED2Q7Z698 418 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 PILRAQ9UKJ1 303 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 ARID2Q68CP9 1835 aa8.68□□□□□ -1.02
CLIP1-201ENST00000302528 NCR2O95944 276 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 CD24P25063 80 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 LHX2P50458 406 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 ZNF525Q8N782 197 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 ZNF114Q8NC26 417 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 NAA38Q9BRA0 125 aaKnown RBP8.67□□□□□ -1.02
CLIP1-201ENST00000302528 COL11A1P12107 1806 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-201ENST00000302528 H3BMM0 161 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 RAMP1O60894 148 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 CCL3L1P16619 93 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 ERCC8Q13216 396 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 LHFPL4Q7Z7J7 247 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 UBE2WQ96B02 151 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 OSTCQ9NRP0 149 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 LOC101059948A0A1B0GTJ6 334 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 A8MXK9 166 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 EIF4EBP2Q13542 120 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-201ENST00000302528 DEFB104AQ8WTQ1 72 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 SCN3AQ9NY46 2000 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 IGHMP01871 453 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 SAA2P0DJI9 122 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-201ENST00000302528 SLC25A45Q8N413 288 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 SPSB2Q99619 263 aa8.67□□□□□ -1.02
CLIP1-201ENST00000302528 IGHV2OR16-5A0A0B4J2B6 119 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 WNT2P09544 360 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 SAP25Q8TEE9 199 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 RBBP6Q7Z6E9 1792 aaKnown RBP8.66□□□□□ -1.02
CLIP1-201ENST00000302528 C17orf100A8MU93 164 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 BCL6BQ8N143 479 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-201ENST00000302528 RPL35AP18077 110 aaKnown RBP8.66□□□□□ -1.02
CLIP1-201ENST00000302528 MESP2Q0VG99 397 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms