RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-202ENST00000301935 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
UBXN1-202ENST00000301935 CFHR3Q02985 330 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 CENPVQ7Z7K6 275 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-202ENST00000301935 FAM223AQ8IWN6 122 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 OR1S2Q8NGQ3 325 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 USMG5Q96IX5 58 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-202ENST00000301935 CITED2Q99967 270 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-202ENST00000301935 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
UBXN1-202ENST00000301935 IGLV11-55A0A075B6I3 123 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 DFFBO76075 338 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 DLK1P80370 383 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 FOXE3Q13461 319 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 FAM209BQ5JX69 171 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 KCNRGQ8N5I3 272 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 TMEM170AQ8WVE7 144 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 FANCD2OSQ96PS1 177 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 ATP6V0BQ99437 205 aa11.76□□□□□ -0.53
UBXN1-202ENST00000301935 A0A0G2JLM5 398 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 RNF222A6NCQ9 220 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 CST7O76096 145 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 EIF2B2P49770 351 aaKnown RBP11.75□□□□□ -0.53
UBXN1-202ENST00000301935 NHLH2Q02577 135 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 CD69Q07108 199 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 SLC38A11Q08AI6 406 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 LILRB2Q8N423 598 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 VN1R17PQ8TDU5 208 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 MISP3Q96FF7 219 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 GAR1Q9NY12 217 aaKnown RBP11.75□□□□□ -0.53
UBXN1-202ENST00000301935 LINC00527Q9UJ94 153 aa11.75□□□□□ -0.53
UBXN1-202ENST00000301935 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
UBXN1-202ENST00000301935 OPRK1P41145 380 aa11.74□□□□□ -0.53
UBXN1-202ENST00000301935 MFAP2P55001 183 aa11.74□□□□□ -0.53
UBXN1-202ENST00000301935 RNF152Q8N8N0 203 aa11.74□□□□□ -0.53
UBXN1-202ENST00000301935 TXN2Q99757 166 aa11.74□□□□□ -0.53
UBXN1-202ENST00000301935 FBXL7Q9UJT9 491 aa11.74□□□□□ -0.53
UBXN1-202ENST00000301935 TRBV7-1A0A0A6YYK4 115 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 SOX15O60248 233 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 TRGV3P03979 118 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 PF4V1P10720 104 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 CD33P20138 364 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 PSMB8P28062 276 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 RAB9AP51151 201 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 RHOGP84095 191 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 ATP5G2Q06055 141 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 ZNF266Q14584 549 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 OR4X2Q8NGF9 303 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 OR5C1Q8NGR4 320 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 SLC35E1Q96K37 410 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 TMEM147Q9BVK8 224 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 UQCC1Q9NVA1 299 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 DNAH9Q9NYC9 4486 aa11.73□□□□□ -0.53
UBXN1-202ENST00000301935 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 BORCS7-ASMTA0A0B4J1R7 106 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 I3L2K1 104 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 JTBO76095 146 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 MT-CO2P00403 227 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 IFNA5P01569 189 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 IGLL1P15814 213 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 CXCL2P19875 107 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-202ENST00000301935 NPBWR1P48145 328 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 MFAP4P55083 255 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 EIF5AP63241 154 aaKnown RBP11.72□□□□□ -0.53
UBXN1-202ENST00000301935 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 LGALSLQ3ZCW2 172 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-202ENST00000301935 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 ATP5SQ99766 215 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 ARPC5LQ9BPX5 153 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 PARD6GQ9BYG4 376 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-202ENST00000301935 ARL6Q9H0F7 186 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 DMRT1Q9Y5R6 373 aa11.72□□□□□ -0.53
UBXN1-202ENST00000301935 TRAV30A0A087WSZ9 112 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 K7EIM0 57 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 MPDU1O75352 247 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 OR2J3O76001 311 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 NDUFB8O95169 186 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 PRH1P02810 166 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 TPPP2P59282 170 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 ARL16Q0P5N6 197 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 RAB31Q13636 194 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 C15orf32Q32M92 178 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 TMEM144Q7Z5S9 345 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 ZNF329Q86UD4 541 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 WFDC9Q8NEX5 89 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms