RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 TMEM238C9JI98 176 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 MPDU1O75352 247 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 APCSP02743 223 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 TNXAQ16473 311 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 MOGAT3Q86VF5 341 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 RPRMLQ8N4K4 120 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 PRR7Q8TB68 274 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 SSMEM1Q8WWF3 244 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 GGTLC1Q9BX51 225 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 SEPSECSQ9HD40 501 aaKnown RBP12.76□□□□□ -0.37
UBAP1-201ENST00000297661 HSBP1O75506 76 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 OR10J4P0C629 311 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 LY6DQ14210 128 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 TBR1Q16650 682 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 PQLC2Q6ZP29 291 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 FOXH1O75593 365 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 WASHC3Q9Y3C0 194 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 HELTA6NFD8 242 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 M0R1B8 84 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 M0R2Z0 102 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 LINC00869P0C866 280 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 SLAQ13239 276 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 AMMECR1LQ6DCA0 310 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 PRR27Q6MZM9 219 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 GCSAMQ8N6F7 178 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 OR8B3Q8NGG8 313 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 OR2V2Q96R30 315 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 OR8B2Q96RD0 313 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
UBAP1-201ENST00000297661 TNCP24821 2201 aa12.74□□□□□ -0.37
UBAP1-201ENST00000297661 UBE2G1P62253 170 aa12.74□□□□□ -0.37
UBAP1-201ENST00000297661 DEFB108BQ8NET1 73 aa12.74□□□□□ -0.37
UBAP1-201ENST00000297661 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
UBAP1-201ENST00000297661 BHLHA15Q7RTS1 189 aaPredicted RBP12.74□□□□□ -0.37
UBAP1-201ENST00000297661 HINT2Q9BX68 163 aa12.74□□□□□ -0.37
UBAP1-201ENST00000297661 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
UBAP1-201ENST00000297661 COL12A1Q99715 3063 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 K7ERU9 68 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 NUDT3O95989 172 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 MT-CO2P00403 227 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 CGAP01215 116 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 USF1P22415 310 aaPredicted RBP12.73□□□□□ -0.37
UBAP1-201ENST00000297661 CRYBB3P26998 211 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 CLEC2AQ6UVW9 174 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 SEM1Q6ZVN7 128 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 TMEM140Q9NV12 185 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 ZNRD1Q9P1U0 126 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 PROCRQ9UNN8 238 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 DSCAMO60469 2012 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 TOX4O94842 621 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 IGLV1-44P01699 117 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 EFNB3Q15768 340 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 SPATA12Q7Z6I5 190 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 IFI27L2Q9H2X8 130 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 SERTAD4Q9NUC0 356 aa12.73□□□□□ -0.37
UBAP1-201ENST00000297661 TECRQ9NZ01 308 aaKnown RBP12.73□□□□□ -0.37
UBAP1-201ENST00000297661 CHTOPQ9Y3Y2 248 aaKnown RBP12.73□□□□□ -0.37
UBAP1-201ENST00000297661 C2orf70A6NJV1 201 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 ADH4P08319 380 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 LOXL3P58215 753 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 KIR3DL3Q8N743 410 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 SARAFQ96BY9 339 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 SRRM5B3KS81 715 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 CA7P43166 264 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 TIGITQ495A1 244 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 BVES-AS1Q5T3Y7 98 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 S1PR3Q99500 378 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 ZNF331Q9NQX6 463 aaPredicted RBP12.72□□□□□ -0.37
UBAP1-201ENST00000297661 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
UBAP1-201ENST00000297661 TRAV17A0A0B4J275 112 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 MUC21A0A0G2JKD1 596 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 MUC21A0A140T8X8 626 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 GAGE12BA1L429 117 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.37
UBAP1-201ENST00000297661 MUC21Q5SSG8 566 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 MBNL2Q5VZF2 373 aaKnown RBP12.71□□□□□ -0.37
UBAP1-201ENST00000297661 FAM90A1Q86YD7 464 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 DEFB125Q8N687 156 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 ITLN1Q8WWA0 313 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 SNRNP40Q96DI7 357 aaKnown RBP12.71□□□□□ -0.37
UBAP1-201ENST00000297661 PCNX1Q96RV3 2341 aa12.71□□□□□ -0.37
UBAP1-201ENST00000297661 ERVK-16P61578 105 aa12.71□□□□□ -0.38
UBAP1-201ENST00000297661 IBA57Q5T440 356 aaKnown RBP12.71□□□□□ -0.38
UBAP1-201ENST00000297661 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.38
UBAP1-201ENST00000297661 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 ISLRO14498 428 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 AREGP15514 252 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 NPY1RP25929 384 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 UCNP55089 124 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 C1orf162Q8NEQ5 155 aaPredicted RBP12.7□□□□□ -0.38
UBAP1-201ENST00000297661 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
UBAP1-201ENST00000297661 MEGF9Q9H1U4 602 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms