RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 MTFP1Q9UDX5 166 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 RABAC1Q9UI14 185 aa14.34□□□□□ -0.11
CXCL3-201ENST00000296026 DEFB4AO15263 64 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 IFNA4P05014 189 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 OPRK1P41145 380 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 MLANAQ16655 118 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 OR4D10Q8NGI6 311 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 ZFAND1Q8TCF1 268 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 RRNAD1Q96FB5 475 aaKnown RBP14.33□□□□□ -0.12
CXCL3-201ENST00000296026 ENY2Q9NPA8 101 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 EXTL2Q9UBQ6 330 aa14.33□□□□□ -0.12
CXCL3-201ENST00000296026 A0A0G2JRQ6 117 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 A0A1W2PS18 150 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 CLN5O75503 358 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 TBPP20226 339 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 STHQ8IWL8 128 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 CCDC71LQ8N9Z2 235 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 TERB2Q8NHR7 220 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 RNASE11Q8TAA1 199 aaKnown RBP14.32□□□□□ -0.12
CXCL3-201ENST00000296026 AP3S1Q92572 193 aa14.32□□□□□ -0.12
CXCL3-201ENST00000296026 UCP1P25874 307 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 SCGB2B2Q4G0G5 96 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 STXBP6Q8NFX7 210 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 OR13C8Q8NGS7 320 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 OR4X1Q8NH49 305 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 TMEM230Q96A57 120 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 METTL26Q96S19 204 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 ABHD1Q96SE0 405 aa14.31□□□□□ -0.12
CXCL3-201ENST00000296026 NAA50Q9GZZ1 169 aaKnown RBP14.31□□□□□ -0.12
CXCL3-201ENST00000296026 K7EQG2 157 aa14.3□□□□□ -0.12
CXCL3-201ENST00000296026 ZNF182P17025 639 aaPredicted RBP14.3□□□□□ -0.12
CXCL3-201ENST00000296026 CRYBB3P26998 211 aa14.3□□□□□ -0.12
CXCL3-201ENST00000296026 RPL5P46777 297 aaKnown RBP14.3□□□□□ -0.12
CXCL3-201ENST00000296026 BSXQ3C1V8 233 aa14.3□□□□□ -0.12
CXCL3-201ENST00000296026 Q6ZRM9 215 aa14.3□□□□□ -0.12
CXCL3-201ENST00000296026 TMEM229BQ8NBD8 167 aa14.3□□□□□ -0.12
CXCL3-201ENST00000296026 MARCH1Q8TCQ1 289 aa14.3□□□□□ -0.12
CXCL3-201ENST00000296026 SCGB2A1O75556 95 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 RAB3DO95716 219 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 CD74P04233 296 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 P2RY1P47900 373 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 TAS2R19P59542 299 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 CTF1Q16619 201 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 TIGITQ495A1 244 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 C2CD4CQ8TF44 421 aa14.29□□□□□ -0.12
CXCL3-201ENST00000296026 B3GALNT1O75752 331 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 GABARAPO95166 117 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 IGKV1-17P01599 117 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 SPCS3P61009 180 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 STEAP1BQ6NZ63 245 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 TRPT1Q86TN4 253 aaKnown RBP14.28□□□□□ -0.12
CXCL3-201ENST00000296026 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 GRAMD2BQ96HH9 432 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 NARS2Q96I59 477 aaKnown RBP14.28□□□□□ -0.12
CXCL3-201ENST00000296026 TMEM222Q9H0R3 208 aa14.28□□□□□ -0.12
CXCL3-201ENST00000296026 TRAV30A0A087WSZ9 112 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 CDS2O95674 445 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 GIG44P09565 113 aaPredicted RBP14.27□□□□□ -0.13
CXCL3-201ENST00000296026 OR5AC1P0C628 307 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 ZNF688P0C7X2 276 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 AARDQ4LEZ3 155 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 FAM219AQ8IW50 185 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 Q8NAQ8 132 aa14.27□□□□□ -0.13
CXCL3-201ENST00000296026 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.27□□□□□ -0.13
CXCL3-201ENST00000296026 RPS10-NUDT3A0A1W2PQS6 291 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 KNCNA6PVL3 124 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 HTR2BP41595 481 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 TCTAP57738 103 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 TMEM41BQ5BJD5 291 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 FAAP20Q6NZ36 180 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 MORN3Q6PF18 240 aaPredicted RBP14.26□□□□□ -0.13
CXCL3-201ENST00000296026 OR52E5Q8NH55 327 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 LHFPL5Q8TAF8 219 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 DCANP1Q8TF63 244 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 GLYATL2Q8WU03 294 aa14.26□□□□□ -0.13
CXCL3-201ENST00000296026 HEYLQ9NQ87 328 aaPredicted RBP14.26□□□□□ -0.13
CXCL3-201ENST00000296026 C14orf166Q9Y224 244 aaKnown RBP14.26□□□□□ -0.13
CXCL3-201ENST00000296026 IGHV4-28A0A0C4DH34 117 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 TEX13DA0A0J9YY54 714 aaPredicted RBP14.25□□□□□ -0.13
CXCL3-201ENST00000296026 GABARAPH6UMI1 98 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 RBMY1A1P0DJD3 496 aaKnown RBP14.25□□□□□ -0.13
CXCL3-201ENST00000296026 RBMY1CP0DJD4 496 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 SPP1P10451 314 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 PRR20EP86478 221 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 PRR20CP86479 221 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 PRR20DP86480 221 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 PRR20BP86481 221 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 PRR20AP86496 221 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 RBMY1FQ15415 496 aaKnown RBP14.25□□□□□ -0.13
CXCL3-201ENST00000296026 RBPMSQ93062 196 aaKnown RBP14.25□□□□□ -0.13
CXCL3-201ENST00000296026 RTBDNQ9BSG5 229 aaPredicted RBP14.25□□□□□ -0.13
CXCL3-201ENST00000296026 MIXL1Q9H2W2 232 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 HRH4Q9H3N8 390 aa14.25□□□□□ -0.13
CXCL3-201ENST00000296026 IGLL5B9A064 214 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 C11orf94C9JXX5 98 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 IGLC1P0CG04 106 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 C4BPBP20851 252 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 EIF2B2P49770 351 aaKnown RBP14.24□□□□□ -0.13
CXCL3-201ENST00000296026 RND2P52198 227 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms