RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HIST3H2BBQ8N257 126 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 JKAMPQ9P055 326 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 GAS1P54826 345 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 VKORC1L1Q8N0U8 176 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 CACNG8Q8WXS5 425 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 KLK15Q9H2R5 256 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 IL18BPO95998 194 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 GPR183P32249 361 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 GPR6P46095 362 aaPredicted RBP9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 SAMD13Q5VXD3 122 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 SLC25A28Q96A46 364 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 C18orf12Q96KH6 178 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 FBLN7Q53RD9 439 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 DYNLRB2Q8TF09 96 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 ST6GALNAC6Q969X2 333 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 DERL1Q9BUN8 251 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 CHODLQ9H9P2 273 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 H3BTX0 84 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 SRXN1Q9BYN0 137 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 OSTCQ9NRP0 149 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 HILPDAQ9Y5L2 63 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 ESPL1Q14674 2120 aa9.91□□□□□ -0.82
SYNGAP1-201ENST00000293748 J3QRE1 110 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 LHX2P50458 406 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 ID3Q02535 119 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 CIARTQ8N365 385 aaPredicted RBP9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 MBD3L1Q8WWY6 194 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 PROK2Q9HC23 129 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 TRBV6-7A0A0A0MS04 114 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 UNQ5815/PRO19632Q6UWF5 114 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 IGFBP2P18065 325 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 FMC1Q96HJ9 113 aa9.9□□□□□ -0.82
SYNGAP1-201ENST00000293748 DNAL4O96015 105 aa9.9□□□□□ -0.83
SYNGAP1-201ENST00000293748 ORMDL3Q8N138 153 aa9.9□□□□□ -0.83
SYNGAP1-201ENST00000293748 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.83
SYNGAP1-201ENST00000293748 FAM89BQ8N5H3 189 aa9.9□□□□□ -0.83
SYNGAP1-201ENST00000293748 BEND2Q8NDZ0 799 aa9.9□□□□□ -0.83
SYNGAP1-201ENST00000293748 C18orf15Q96N68 181 aa9.9□□□□□ -0.83
SYNGAP1-201ENST00000293748 SYNGR3O43761 229 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 TNFSF13O75888 250 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 OR5A1Q8NGJ0 315 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 RNF138Q8WVD3 245 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 GTF3AQ92664 365 aaKnown RBP9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 GEMIN7Q9H840 131 aaKnown RBP9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 ZNF257Q9Y2Q1 563 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 IGKV1D-43A0A0B4J1Z2 117 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 A0A1B0GW64 132 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 NPIPB11E5RHQ5 1161 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 H3BUT2 72 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 MOSP00540 346 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 ADMP35318 185 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 TMEM144Q7Z5S9 345 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 LEAP2Q969E1 77 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 REG4Q9BYZ8 158 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 TSPAN13O95857 204 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 ADRA2AP08913 450 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 DDB2Q92466 427 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 ELOVL5Q9NYP7 299 aa9.89□□□□□ -0.83
SYNGAP1-201ENST00000293748 ZNHIT1O43257 154 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 SNAI2O43623 268 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 AMBPP02760 352 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 GPX1P07203 203 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 OR52E5Q8NH55 327 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 GNB1LQ9BYB4 327 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 MBD3L4A6NDZ8 208 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 MBD3L3A6NE82 208 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 MBD3L5A6NJ08 208 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 HIGD1CA8MV81 97 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 CA1P00915 261 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 REG1AP05451 166 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 TSPOP30536 169 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 OR10J3Q5JRS4 329 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 MEIG1Q5JSS6 88 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 TMEM170BQ5T4T1 132 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 MBD3L2Q8NHZ7 208 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 BEX4Q9NWD9 120 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 AKAP6Q13023 2319 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 RNASE6Q93091 150 aaKnown RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 EAF1Q96JC9 268 aaPredicted RBP9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 CLEC7AQ9BXN2 247 aa9.88□□□□□ -0.83
SYNGAP1-201ENST00000293748 DOCK10Q96BY6 2186 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 TRAV1-1A0A0B4J248 108 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 NPPCP23582 126 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 RPL39P5Q59GN2 51 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 PNKDQ8N490 385 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 ZNF418Q8TF45 676 aaPredicted RBP9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 FOXC2Q99958 501 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 REPIN1Q9BWE0 567 aaKnown RBP9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 C1QTNF5Q9BXJ0 243 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 A0A1W2PRE2 83 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 PF4V1P10720 104 aa9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 NUTF2P61970 127 aaKnown RBP9.87□□□□□ -0.83
SYNGAP1-201ENST00000293748 SEC11AP67812 179 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms