RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 MORN5Q5VZ52 161 aa12.17□□□□□ -0.46
CCDC116-201ENST00000292779 GBGT1Q8N5D6 347 aa12.17□□□□□ -0.46
CCDC116-201ENST00000292779 LRBAP50851 2863 aa12.17□□□□□ -0.46
CCDC116-201ENST00000292779 TRAV5A0A0B4J249 113 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 PSMB11A5LHX3 300 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 TGIF2LXQ8IUE1 241 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 RITA1Q96K30 269 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
CCDC116-201ENST00000292779 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 SLC25A17O43808 307 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 CBLN1P23435 193 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 SUMO1P63165 101 aaKnown RBP12.16□□□□□ -0.46
CCDC116-201ENST00000292779 RBPJQ06330 500 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 TMEM256Q8N2U0 113 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 FAM167A-AS1Q96KT0 104 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 KAAG1Q9UBP8 84 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 V9GYV3 84 aa12.16□□□□□ -0.46
CCDC116-201ENST00000292779 SPTBN1Q01082 2364 aaKnown RBP12.15□□□□□ -0.46
CCDC116-201ENST00000292779 TRAV9-1A0A075B6T8 112 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
CCDC116-201ENST00000292779 GCGP01275 180 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 IGHV1-8P0DP01 117 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 ZNF137PP52743 207 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 LGALS4P56470 323 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 RPEL1Q2QD12 228 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 MRPL32Q9BYC8 188 aaKnown RBP12.15□□□□□ -0.46
CCDC116-201ENST00000292779 DNAJC4Q9NNZ3 241 aa12.15□□□□□ -0.46
CCDC116-201ENST00000292779 A0A087X0M5 115 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 IGHV1-69-2A0A0G2JMI3 117 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 A0A1B0GX30 115 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 A0A1W2PRE2 83 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 CDSNQ15517 529 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
CCDC116-201ENST00000292779 MMD2Q8IY49 270 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 NPIPB3Q92617 1050 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 VKORC1Q9BQB6 163 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 IGHV3-72A0A0B4J1Y9 119 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 ZNF705GA8MUZ8 300 aaPredicted RBP12.14□□□□□ -0.47
CCDC116-201ENST00000292779 NUPR1O60356 82 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 REG1AP05451 166 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 DDTP30046 118 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 LURAP1LQ8IV03 231 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
CCDC116-201ENST00000292779 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 GRIFINA4D1Z8 144 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 PLAUP00749 431 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 FRMD6-AS1P0C7T7 363 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 APOBEC3AP31941 199 aaPredicted RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 SUB1P53999 127 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 UBE2L3P68036 154 aaKnown RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 OR5AU1Q8NGC0 362 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 RNASE7Q9H1E1 156 aaKnown RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 MRPL36Q9P0J6 103 aaKnown RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 HRNRQ86YZ3 2850 aaPredicted RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 IGKV1D-37A0A075B6S9 117 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 A0A1W2PPI3 338 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 MC5RP33032 325 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 DLX1P56177 255 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 TIGITQ495A1 244 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 OR1L6Q8NGR2 347 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 RNF2Q99496 336 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 TMEM133Q9H2Q1 129 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 DCHS2Q6V1P9 2916 aa12.13□□□□□ -0.47
CCDC116-201ENST00000292779 UTP20O75691 2785 aaKnown RBP12.13□□□□□ -0.47
CCDC116-201ENST00000292779 TCRBV4S1A1TA0A5B7 111 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 IGLV2-8P01709 118 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 PATE2Q6UY27 113 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 OR8I2Q8N0Y5 310 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 ZNF355PQ9NSJ1 428 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 MALRD1Q5VYJ5 2156 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 CD3EP07766 207 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 PYYP10082 97 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 IER3P46695 156 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 PPOXP50336 477 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 SELENOTP62341 195 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
CCDC116-201ENST00000292779 FXYD3Q14802 87 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 C10orf113Q5VZT2 155 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 ST6GALNAC3Q8NDV1 305 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 IGF2BP2-AS1Q96M15 143 aa12.12□□□□□ -0.47
CCDC116-201ENST00000292779 B9A039 149 aa12.11□□□□□ -0.47
CCDC116-201ENST00000292779 LYNX1G3V0Z9 82 aa12.11□□□□□ -0.47
CCDC116-201ENST00000292779 LYNX1P0DP58 116 aa12.11□□□□□ -0.47
CCDC116-201ENST00000292779 SFTPCP11686 197 aa12.11□□□□□ -0.47
CCDC116-201ENST00000292779 THAP8Q8NA92 274 aa12.11□□□□□ -0.47
CCDC116-201ENST00000292779 FCN1O00602 326 aa12.11□□□□□ -0.47
CCDC116-201ENST00000292779 PAX1P15863 534 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms