RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ARL17AQ8IVW1 177 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 RNF182Q8N6D2 247 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 EPDR1Q9UM22 224 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 PKIGQ9Y2B9 76 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 HIGD1CA8MV81 97 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 PRSS53Q2L4Q9 553 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 ZNF56Q15929 161 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 IL17BQ9UHF5 180 aa12.37□□□□□ -0.43
SEC16A-202ENST00000290037 OBSL1O75147 1896 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 ATP5J2P56134 94 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 RNF125Q96EQ8 232 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 PLSCR4Q9NRQ2 329 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 RNF126Q9BV68 326 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 USF3Q68DE3 2245 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 TCF21O43680 179 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 SCGB3A1Q96QR1 104 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 C1QTNF4Q9BXJ3 329 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 TMEM50AO95807 157 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 EAF1Q96JC9 268 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-202ENST00000290037 ALPK3Q96L96 1907 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 NTN1O95631 604 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
SEC16A-202ENST00000290037 RIF1Q5UIP0 2472 aaKnown RBP12.35□□□□□ -0.43
SEC16A-202ENST00000290037 NDUFS8O00217 210 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 MYF5P13349 255 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 CNTFRP26992 372 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 RPL23P62829 140 aaKnown RBP12.35□□□□□ -0.43
SEC16A-202ENST00000290037 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 DUX5Q96PT3 197 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 ZNF137PP52743 207 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 PRSS12P56730 875 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 C9orf139Q6ZV77 190 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 PRSS8Q16651 343 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 C10orf126Q8N4M7 172 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 FAM168AQ92567 244 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 WDR82Q6UXN9 313 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 LY6G6FQ5SQ64 297 aa12.35□□□□□ -0.43
SEC16A-202ENST00000290037 PLEKHB2Q96CS7 222 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 C1QL1O75973 258 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.435e-7■■■■□ 20
SEC16A-202ENST00000290037 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 TRGV3P03979 118 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 GATA4P43694 442 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 FBLN7Q53RD9 439 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 PSG7Q13046 419 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 OR2K2Q8NGT1 345 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 ARL6IP6Q8N6S5 226 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 FBXL7Q9UJT9 491 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 CEP192Q8TEP8 1941 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 MGST2Q99735 147 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 PRR13Q9NZ81 148 aa12.34□□□□□ -0.43
SEC16A-202ENST00000290037 PGPEP1LA6NFU8 196 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 TMEM155Q4W5P6 130 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 IL17RELQ6ZVW7 336 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 TMEM86BQ8N661 226 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 TRAV39A0A0B4J263 110 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 NMSQ5H8A3 153 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 C8orf31Q8N9H6 132 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 PRSS22Q9GZN4 317 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 ZNF71Q9NQZ8 489 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-202ENST00000290037 ANAPC10Q9UM13 185 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-202ENST00000290037 GAS1P54826 345 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 RPUSD1Q9UJJ7 312 aaKnown RBP12.33□□□□□ -0.44
SEC16A-202ENST00000290037 CACNA1BQ00975 2339 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 LOC389332A0A1B0GUA5 103 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 PRR19A6NJB7 356 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 RRHO14718 337 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 C1orf194Q5T5A4 169 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 RPRMLQ8N4K4 120 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 NEU1Q99519 415 aa12.33□□□□□ -0.44
SEC16A-202ENST00000290037 GPR183P32249 361 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 HILPDAQ9Y5L2 63 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 TNFSF13O75888 250 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 CBLN1P23435 193 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 NEGR1Q7Z3B1 354 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 RTN4RQ9BZR6 473 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 WNT2P09544 360 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 DCTN5Q9BTE1 182 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
SEC16A-202ENST00000290037 APOHP02749 345 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-202ENST00000290037 LAGE3Q14657 143 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 ACTL10Q5JWF8 245 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 KIR3DL3Q8N743 410 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 EFNB3Q15768 340 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 REG1BP48304 166 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 VKORC1L1Q8N0U8 176 aa12.31□□□□□ -0.44
SEC16A-202ENST00000290037 SAA1P0DJI8 122 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms