RNA–Protein interactions for RNA: ENST00000284617.6

CCSAP-201, Transcript of centriole, cilia and spindle associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSAP, Length 5,121 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-201ENST00000284617 GNB1LQ9BYB4 327 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 TRAV1-1A0A0B4J248 108 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 HAX1O00165 279 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 SNAI2O43623 268 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 EMP1P54849 157 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 TEX38Q6PEX7 206 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 NABP1Q96AH0 204 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 C2orf88Q9BSF0 95 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 OR9G9P0C7N8 305 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 JKAMPQ9P055 326 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 CHD5Q8TDI0 1954 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 AKAP6Q13023 2319 aa17.59■□□□□ 0.41
CCSAP-201ENST00000284617 PSMB11A5LHX3 300 aa17.58■□□□□ 0.41
CCSAP-201ENST00000284617 GNG5P63218 68 aa17.58■□□□□ 0.41
CCSAP-201ENST00000284617 SUPT4H1P63272 117 aaKnown RBP17.58■□□□□ 0.41
CCSAP-201ENST00000284617 FGFBP3Q8TAT2 258 aa17.58■□□□□ 0.41
CCSAP-201ENST00000284617 IGKV3OR2-268A0A0C4DH90 116 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 DMRTA1Q5VZB9 504 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 RALGAPA1Q6GYQ0 2036 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 A0A1B0GW64 132 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 H3BRM9 83 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 TMEM190Q8WZ59 177 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 TNFRSF14Q92956 283 aa17.58■□□□□ 0.4
CCSAP-201ENST00000284617 RNASE6Q93091 150 aaKnown RBP17.58■□□□□ 0.4
CCSAP-201ENST00000284617 EP300Q09472 2414 aaPredicted RBP17.57■□□□□ 0.4
CCSAP-201ENST00000284617 LCTP09848 1927 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 PPBPP02775 128 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 CYTL1Q9NRR1 136 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 PDCD11Q14690 1871 aaKnown RBP17.57■□□□□ 0.4
CCSAP-201ENST00000284617 RNASE1P07998 156 aaKnown RBP17.57■□□□□ 0.4
CCSAP-201ENST00000284617 OR10J3Q5JRS4 329 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 FAM168AQ92567 244 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 WNK3Q9BYP7 1800 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 CFHR1Q03591 330 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 FAM166AQ6J272 317 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 SPCS1Q9Y6A9 102 aa17.57■□□□□ 0.4
CCSAP-201ENST00000284617 IGHV1-18A0A0C4DH31 117 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 A0A1B0GWB2 263 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 NTN3O00634 580 aaPredicted RBP17.56■□□□□ 0.4
CCSAP-201ENST00000284617 OR13C6PQ8NH95 151 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 IGHV3OR16-8A0A075B7F1 116 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 PYYP10082 97 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 ST6GALNAC3Q8NDV1 305 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 TMEM50AO95807 157 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 PSG8Q9UQ74 426 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 ZNF257Q9Y2Q1 563 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 TRAV9-2A0A087WT02 112 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 DMRTA2Q96SC8 542 aa17.56■□□□□ 0.4
CCSAP-201ENST00000284617 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 PINLYPA6NC86 204 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 SSBP4Q9BWG4 385 aaPredicted RBP17.55■□□□□ 0.4
CCSAP-201ENST00000284617 CNOT1A5YKK6 2376 aaKnown RBP17.55■□□□□ 0.4
CCSAP-201ENST00000284617 HBDP02042 147 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 LINC00614P0C842 121 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 TREML4Q6UXN2 200 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 GGNQ86UU5 652 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 C17orf82Q86X59 251 aaPredicted RBP17.55■□□□□ 0.4
CCSAP-201ENST00000284617 C5orf30Q96GV9 206 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 DUX3Q96PT4 197 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 SCN8AQ9UQD0 1980 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 SRRM5B3KS81 715 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 STAG3L3P0CL85 134 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 LEPP41159 167 aa17.55■□□□□ 0.4
CCSAP-201ENST00000284617 NYNRINQ9P2P1 1898 aaKnown RBP17.54■□□□□ 0.4
CCSAP-201ENST00000284617 TSKUQ8WUA8 353 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 C7orf69Q9H7B7 122 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 NXT2Q9NPJ8 142 aaKnown RBP17.54■□□□□ 0.4
CCSAP-201ENST00000284617 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 COLCA2A8K830 154 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 VSIRQ9H7M9 311 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 SPRR3Q9UBC9 169 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 RPUSD1Q9UJJ7 312 aaKnown RBP17.54■□□□□ 0.4
CCSAP-201ENST00000284617 ATP5L2Q7Z4Y8 100 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 GREB1Q4ZG55 1949 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 PF4P02776 101 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 MYOD1P15172 320 aa17.54■□□□□ 0.4
CCSAP-201ENST00000284617 RNASE4P34096 147 aaKnown RBP17.54■□□□□ 0.4
CCSAP-201ENST00000284617 PGPEP1LA6NFU8 196 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 TMEM262E9PQX1 116 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 OR4X2Q8NGF9 303 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 HIST1H2BLQ99880 126 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 FAM71F2Q6NXP2 309 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 C1QL4Q86Z23 238 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 MESP1Q9BRJ9 268 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 GGTLC1Q9BX51 225 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 A0A0G2JMZ2 1700 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 LRRC37A2A6NM11 1700 aa17.53■□□□□ 0.4
CCSAP-201ENST00000284617 NMSQ5H8A3 153 aa17.52■□□□□ 0.4
CCSAP-201ENST00000284617 IGKV1-27A0A075B6S5 117 aa17.52■□□□□ 0.4
CCSAP-201ENST00000284617 C8orf46Q8TAG6 207 aa17.52■□□□□ 0.4
CCSAP-201ENST00000284617 CHCHD1Q96BP2 118 aaKnown RBP17.52■□□□□ 0.4
CCSAP-201ENST00000284617 FOXF2Q12947 444 aa17.52■□□□□ 0.39
CCSAP-201ENST00000284617 ZNF418Q8TF45 676 aaPredicted RBP17.52■□□□□ 0.39
CCSAP-201ENST00000284617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.51■□□□□ 0.39
CCSAP-201ENST00000284617 IGHV1-46P01743 117 aa17.51■□□□□ 0.39
CCSAP-201ENST00000284617 TFF1P04155 84 aa17.51■□□□□ 0.39
CCSAP-201ENST00000284617 TIMP3P35625 211 aa17.51■□□□□ 0.39
CCSAP-201ENST00000284617 FREM3P0C091 2139 aa17.51■□□□□ 0.39
CCSAP-201ENST00000284617 NDUFA3O95167 84 aa17.51■□□□□ 0.39
CCSAP-201ENST00000284617 CSRP1P21291 193 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms