RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 OR4D11Q8NGI4 311 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 IMMP1LQ96LU5 166 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 SAA2-SAA4A0A096LPE2 208 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 SAA2P0DJI9 122 aaPredicted RBP3.42□□□□□ -1.86
SCN3A-201ENST00000283254 CXCL3P19876 107 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 KIAA1644Q3SXP7 199 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 RASL11AQ6T310 242 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 OR10W1Q8NGF6 305 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 FOXC2Q99958 501 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 IGLV3-12A0A075B6K2 115 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 YPEL1O60688 119 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 NAPSAO96009 420 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 SAA1P0DJI8 122 aaPredicted RBP3.42□□□□□ -1.86
SCN3A-201ENST00000283254 PRCDQ00LT1 54 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 PAX8Q06710 450 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 FAM27E3Q08E93 113 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF79Q15937 498 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 YPEL2Q96QA6 119 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 ANKRD31Q8N7Z5 1873 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.42□□□□□ -1.86
SCN3A-201ENST00000283254 TRAV40A0A0B4J280 105 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 A0A1W2PRE2 83 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 PROB1E7EW31 1015 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 DDTP30046 118 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM187Q14656 261 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 COL24A1Q17RW2 1714 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 FBLN5Q9UBX5 448 aa3.42□□□□□ -1.86
SCN3A-201ENST00000283254 ELF5Q9UKW6 265 aaPredicted RBP3.42□□□□□ -1.86
SCN3A-201ENST00000283254 IGHV3-35A0A0C4DH35 117 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 CD33P20138 364 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 ATXN8Q156A1 80 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 PRR32B1ATL7 298 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 RHODO00212 210 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 LINC00271P0C7V0 271 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 HOXD3P31249 432 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 MESP2Q0VG99 397 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 ATP1A1-AS1Q5TC04 95 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 RGP1Q92546 391 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 TM2D1Q9BX74 207 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 Q9H3A6 140 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 F11RQ9Y624 299 aaKnown RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 DICER1Q9UPY3 1922 aaKnown RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 M0R1W7 72 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 HBDP02042 147 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 NMBP08949 121 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 FUT5Q11128 374 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 ST6GALNAC3Q8NDV1 305 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 RBM38Q9H0Z9 239 aaKnown RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM160Q9NX00 188 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 DLEC1Q9Y238 1755 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 H3BTX0 84 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 KLF4O43474 513 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 KLK2P20151 261 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF415Q09FC8 603 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 SIGLEC15Q6ZMC9 328 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 ARL6IP6Q8N6S5 226 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 MGST2Q99735 147 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 THADAQ6YHU6 1953 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 SCN8AQ9UQD0 1980 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 A0A1B0GWB2 263 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 PLA2G10O15496 165 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 C1QL1O75973 258 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 AMBPP02760 352 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 CDKN1AP38936 164 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 PAX2Q02962 417 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 MIXL1Q9H2W2 232 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 LY75O60449 1722 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 PQLC2LA1A4F0 135 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 IFITM2Q01629 132 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 MARVELD3Q96A59 401 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 PPP1R3EQ9H7J1 279 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 APOHP02749 345 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 SNRPCP09234 159 aaKnown RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 GZMMP51124 257 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 TDGF1P3P51864 188 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 C15orf32Q32M92 178 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 ATP5L2Q7Z4Y8 100 aa3.41□□□□□ -1.86
SCN3A-201ENST00000283254 PARD6GQ9BYG4 376 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 CHTOPQ9Y3Y2 248 aaKnown RBP3.41□□□□□ -1.86
SCN3A-201ENST00000283254 LRRK1Q38SD2 2015 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 TET1Q8NFU7 2136 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 IGHV3-49A0A0A0MS15 119 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 A0A1B0GTI1 187 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 FAM223BA6NKX1 122 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 UNQ6494/PRO21346Q6UXR6 183 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 DAZ1Q9NQZ3 744 aaKnown RBP3.4□□□□□ -1.86
SCN3A-201ENST00000283254 COL5A3P25940 1745 aaPredicted RBP3.4□□□□□ -1.86
SCN3A-201ENST00000283254 TRBV6-7A0A0A0MS04 114 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 SLC17A3O00476 420 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 RFPL3SP0C7P2 107 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 SNAI3Q3KNW1 292 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 MRPL14Q6P1L8 145 aaKnown RBP3.4□□□□□ -1.86
SCN3A-201ENST00000283254 LEAP2Q969E1 77 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 IGKV1D-42A0A075B6H8 117 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 IZUMO1RA6ND01 250 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 DPRXA6NFQ7 191 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 SRRM5B3KS81 715 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms