RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PGA5P0DJD9 388 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 FCER1GP30273 86 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 TNFRSF9Q07011 255 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ARL16Q0P5N6 197 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 FHL1Q13642 323 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ZNF343Q6P1L6 599 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ZNF645Q8N7E2 425 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 FDCSPQ8NFU4 85 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 VSTM2AQ8TAG5 236 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 TMEM167BQ9NRX6 74 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 DEPPQ9NTK1 212 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 PITPNC1Q9UKF7 332 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 PRNDQ9UKY0 176 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 FER1L5A0AVI2 2057 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 ODAMA1E959 279 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 TMEM50AO95807 157 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 SMIM6P0DI80 62 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 MED14OSP0DP75 135 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 COX5BP10606 129 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 C10orf113Q5VZT2 155 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 HCP5Q6MZN7 132 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 DPPA3Q6W0C5 159 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 PDPNQ86YL7 162 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 SAXO1Q8IYX7 474 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 C11orf42Q8N5U0 333 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 OR4F17Q8NGA8 305 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 ZNF596Q8TC21 504 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 FGF11Q92914 225 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 HIST1H2BAQ96A08 127 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 GALNT14Q96FL9 552 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 WWC2-AS2Q96NR7 200 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 NDFIP1Q9BT67 221 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 PXMP4Q9Y6I8 212 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 DOCK7Q96N67 2140 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 DOCK9Q9BZ29 2069 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 TLN2Q9Y4G6 2542 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 SNURFLB1AK76 121 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 K7N7A8 449 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 DNASE2O00115 360 aaPredicted RBP2.36□□□□□ -2.03
HERC4-201ENST00000277817 MLNRO43193 412 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 OR2J3O76001 311 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 CYB5R3P00387 301 aaPredicted RBP2.36□□□□□ -2.03
HERC4-201ENST00000277817 PLAUP00749 431 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 USF1P22415 310 aaPredicted RBP2.36□□□□□ -2.03
HERC4-201ENST00000277817 HTR1DP28221 377 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 OR10J1P30954 320 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 UCNP55089 124 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 FOXG1P55316 489 aaPredicted RBP2.36□□□□□ -2.03
HERC4-201ENST00000277817 SPCS3P61009 180 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 PSG7Q13046 419 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 HLA-DRB5Q30154 266 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 FAM201AQ5SY85 155 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 FAM89BQ8N5H3 189 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 KLHDC1Q8N7A1 406 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 MAPKAPK5-AS1Q8N8E1 139 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 ZIC4Q8N9L1 334 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 OR2D3Q8NGH3 330 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 OR1L6Q8NGR2 347 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 OR1L8Q8NGR8 309 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 PRSS3P2Q8NHM4 247 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 RITA1Q96K30 269 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 KIAA2026Q5HYC2 2103 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1D-13A0A0B4J2D9 117 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1-12A0A0C4DH73 117 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 PINLYPA6NC86 204 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 C12orf77C9JDV5 145 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1D-12P01611 117 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 TFF1P04155 84 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1-13P0DP09 117 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 RPL39P5Q59GN2 51 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 FA2HQ7L5A8 372 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 C17orf82Q86X59 251 aaPredicted RBP2.36□□□□□ -2.03
HERC4-201ENST00000277817 VN1R17PQ8TDU5 208 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 ZNF524Q96C55 264 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 SMIM8Q96KF7 97 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 LINC00470Q9BZP3 86 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 ASCL3Q9NQ33 180 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 CALYQ9NYX4 217 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 PI4KAP42356 2102 aa2.36□□□□□ -2.03
HERC4-201ENST00000277817 CEACAM18A8MTB9 384 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 C17orf98A8MV24 154 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 GNG7O60262 68 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR4A8P0C604 315 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PAX6P26367 422 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CD82P27701 267 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CCKARP32238 428 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HNRNPA3P51991 378 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF137PP52743 207 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CCL20P78556 96 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PIK3CD-AS1Q5SR53 167 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 FAM162BQ5T6X4 162 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 Q6ZT83 130 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 FAM222BQ8WU58 562 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 DLX4Q92988 240 aaPredicted RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 LSM10Q969L4 123 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF714Q96N38 554 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 WFIKKN1Q96NZ8 548 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 QTRT1Q9BXR0 403 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 WDR61Q9GZS3 305 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms