RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CORTO00230 105 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 FOLR2P14207 255 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 RND2P52198 227 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 SELENOTP62341 195 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 C5orf64Q2M2E5 130 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 FBLN7Q53RD9 439 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 Q8N6K4 173 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 MALSU1Q96EH3 234 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 RNF2Q99496 336 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 DMRT1Q9Y5R6 373 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 ZNF90Q03938 601 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 FXYD3Q14802 87 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 RUSC1-AS1Q66K80 236 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 ZNF843Q8N446 348 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 TMEM116Q8NCL8 245 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 C10orf105Q8TEF2 133 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 FAM168AQ92567 244 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 AJUBAQ96IF1 538 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 WNT10AQ9GZT5 417 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 TMEM242Q9NWH2 141 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 MLXQ9UH92 298 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 YTHDF2Q9Y5A9 579 aaKnown RBP7.62□□□□□ -1.19
TRIM55-201ENST00000276573 PLXNB1O43157 2135 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 ACACBO00763 2458 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 CFAP46Q8IYW2 2715 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 C8orf88P0DMB2 117 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 CTRB1P17538 263 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
TRIM55-201ENST00000276573 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
TRIM55-201ENST00000276573 KIAA0141Q14154 515 aaPredicted RBP7.62□□□□□ -1.19
TRIM55-201ENST00000276573 CTRB2Q6GPI1 263 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 PATE2Q6UY27 113 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 OR51G1Q8NGK1 321 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 OR1L4Q8NGR5 311 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 ZNF503Q96F45 646 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 TRGV9Q99603 122 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 PIMREGQ9BSJ6 248 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 MRPL32Q9BYC8 188 aaKnown RBP7.62□□□□□ -1.19
TRIM55-201ENST00000276573 LPAR2Q9HBW0 351 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 TMEM167BQ9NRX6 74 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 TNFRSF19Q9NS68 423 aa7.62□□□□□ -1.19
TRIM55-201ENST00000276573 IGHV3-21A0A0B4J1V1 117 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 VWC2LB2RUY7 222 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 NDUFS8O00217 210 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 TSPAN9O75954 239 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 NDUFB4O95168 129 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 RAB5AP20339 215 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 ATP5J2P56134 94 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 TAS2R45P59539 299 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 PAX8Q06710 450 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 ADIRFQ15847 76 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 ZNF562Q6V9R5 426 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 OR4X1Q8NH49 305 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 PFDN5Q99471 154 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 CTDSP1Q9GZU7 261 aa7.61□□□□□ -1.19
TRIM55-201ENST00000276573 TRAV5A0A0B4J249 113 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 IGHV4-61A0A0C4DH41 118 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 NCBP2LA6PVI3 153 aaKnown RBP7.6□□□□□ -1.19
TRIM55-201ENST00000276573 CLDN34H7C241 214 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 I3L2K1 104 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 COX7A2P2O60397 106 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 CX3CL1P78423 397 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 ELOBQ15370 118 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 MORN5Q5VZ52 161 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 C10orf113Q5VZT2 155 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 ZNF343Q6P1L6 599 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 OR1L6Q8NGR2 347 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 C22orf15Q8WYQ4 148 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 FAM167A-AS1Q96KT0 104 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 DOK5Q9P104 306 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 PRELID1Q9Y255 219 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 CACNA1BQ00975 2339 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 OR7C2O60412 319 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 FAM106CPP0CH98 169 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 TMEM11P17152 192 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 SAA4P35542 130 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 FAM120AOSQ5T036 256 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 CLEC2AQ6UVW9 174 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 FAM103A1Q9BTL3 118 aaKnown RBP7.6□□□□□ -1.19
TRIM55-201ENST00000276573 SLC25A2Q9BXI2 301 aa7.6□□□□□ -1.19
TRIM55-201ENST00000276573 ELOA3CA0A087WX78 387 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-201ENST00000276573 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 C1orf196B1AJZ1 125 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 NPFFO15130 113 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 BRS3P32247 399 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 SRSF1Q07955 248 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRIM55-201ENST00000276573 Q8WTZ3 238 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 UHRF2Q96PU4 802 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 DERL1Q9BUN8 251 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 GSX1Q9H4S2 264 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-201ENST00000276573 C1RLQ9NZP8 487 aa7.59□□□□□ -1.19
TRIM55-201ENST00000276573 IGHV4-30-2A0A087WSY4 118 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 K7EIM0 57 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 CXCL1P09341 107 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 BPIFB3P59826 476 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 ASPHD1Q5U4P2 390 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 C16orf82Q7Z2V1 217 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms