RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SSNA1O43805 119 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 PAX9P55771 341 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 IL15RAQ13261 267 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 SPANXN5Q5MJ07 72 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 RNASEH2CQ8TDP1 164 aaKnown RBP9.75□□□□□ -0.85
SS18-202ENST00000269138 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
SS18-202ENST00000269138 ZNF414Q96IQ9 312 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 CIB3Q96Q77 187 aaPredicted RBP9.75□□□□□ -0.85
SS18-202ENST00000269138 PAIP2BQ9ULR5 123 aaKnown RBP9.75□□□□□ -0.85
SS18-202ENST00000269138 RCL1Q9Y2P8 373 aaKnown RBP9.75□□□□□ -0.85
SS18-202ENST00000269138 IFNA4P05014 189 aa9.74□□□□□ -0.85
SS18-202ENST00000269138 CTSGP08311 255 aa9.74□□□□□ -0.85
SS18-202ENST00000269138 OXA1LQ15070 435 aa9.74□□□□□ -0.85
SS18-202ENST00000269138 IL34Q6ZMJ4 242 aa9.74□□□□□ -0.85
SS18-202ENST00000269138 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
SS18-202ENST00000269138 TXN2Q99757 166 aa9.74□□□□□ -0.85
SS18-202ENST00000269138 PSENENQ9NZ42 101 aa9.74□□□□□ -0.85
SS18-202ENST00000269138 LSM5Q9Y4Y9 91 aaKnown RBP9.74□□□□□ -0.85
SS18-202ENST00000269138 K7EPK0 472 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 EDN2P20800 178 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 FCGR2BP31994 310 aaPredicted RBP9.73□□□□□ -0.85
SS18-202ENST00000269138 PRSS54Q6PEW0 395 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 NOXA1Q86UR1 476 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 OR9G4Q8NGQ1 327 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 ATP6V0BQ99437 205 aa9.73□□□□□ -0.85
SS18-202ENST00000269138 MCRIP2Q9BUT9 160 aaKnown RBP9.73□□□□□ -0.85
SS18-202ENST00000269138 NOTCH1P46531 2555 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 IGHV3OR16-8A0A075B7F1 116 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 RPS10-NUDT3A0A1W2PQS6 291 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 ZNF320A2RRD8 509 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 GNG7O60262 68 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 NPBWR1P48145 328 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 RND2P52198 227 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 ATP5IP56385 69 aaPredicted RBP9.72□□□□□ -0.85
SS18-202ENST00000269138 H2BFSP57053 126 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 CD69Q07108 199 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 RAB32Q13637 225 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 BEAN1Q3B7T3 259 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 C9orf66Q5T8R8 295 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 SPSB3Q6PJ21 355 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 MGAT4CQ9UBM8 478 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 STRAPQ9Y3F4 350 aaKnown RBP9.72□□□□□ -0.85
SS18-202ENST00000269138 NUPL2O15504 423 aaKnown RBP9.72□□□□□ -0.85
SS18-202ENST00000269138 SAP30O75446 220 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 CLN5O75503 358 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 CCNKO75909 580 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 CSN3P07498 182 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 S100A10P60903 97 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 RAB11AP62491 216 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 RPP30P78346 268 aaKnown RBP9.72□□□□□ -0.85
SS18-202ENST00000269138 FAM106AQ4KMX7 169 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 SLC16A13Q7RTY0 426 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 HAPLN4Q86UW8 402 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 NPIPB3Q92617 1050 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 ACY3Q96HD9 319 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 ZNF436Q9C0F3 470 aaPredicted RBP9.72□□□□□ -0.85
SS18-202ENST00000269138 C11orf1Q9H5F2 150 aa9.72□□□□□ -0.85
SS18-202ENST00000269138 GAR1Q9NY12 217 aaKnown RBP9.72□□□□□ -0.85
SS18-202ENST00000269138 PRSS46E5RG02 174 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 LGALS9O00182 355 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 LY86O95711 162 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 SLC25A4P12235 298 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 GPX4P36969 197 aaPredicted RBP9.71□□□□□ -0.86
SS18-202ENST00000269138 TIGITQ495A1 244 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 TM4SF20Q53R12 229 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 REC114Q7Z4M0 266 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 ELOVL1Q9BW60 279 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 FBN3Q75N90 2809 aa9.71□□□□□ -0.86
SS18-202ENST00000269138 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 L7N2F9 121 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 IGKV1-17P01599 117 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 PRB2P02812 416 aaPredicted RBP9.7□□□□□ -0.86
SS18-202ENST00000269138 METTL15P1P0C7V9 234 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 CXCL3P19876 107 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 TAS2R30P59541 319 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 VAMP2P63027 116 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 GAMTQ14353 236 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 FCN2Q15485 313 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 KPRPQ5T749 579 aaPredicted RBP9.7□□□□□ -0.86
SS18-202ENST00000269138 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 TMEM14EPQ6UXP3 125 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 TMEM116Q8NCL8 245 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 NMES1Q9C002 83 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 SELENOKQ9Y6D0 94 aa9.7□□□□□ -0.86
SS18-202ENST00000269138 TMEM213A2RRL7 107 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 FAM24AA6NFZ4 105 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 C2orf70A6NJV1 201 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 NDUFA4O00483 81 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 WIPF1O43516 503 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 ZNF207O43670 478 aaKnown RBP9.69□□□□□ -0.86
SS18-202ENST00000269138 TSC22D2O75157 780 aa9.69□□□□□ -0.86
SS18-202ENST00000269138 IGLC1P0CG04 106 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms