RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CSRP1P21291 193 aaKnown RBP9.61□□□□□ -0.87
VPS33A-201ENST00000267199 LHFPL4Q7Z7J7 247 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 DPF1Q92782 380 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 ALPK3Q96L96 1907 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 GLRXP35754 106 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 CEACAM3P40198 252 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 TMEM14EPQ6UXP3 125 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 FOXL2NBQ6ZUU3 175 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 RAB1CQ92928 201 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 GGTLC1Q9BX51 225 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 MRPL32Q9BYC8 188 aaKnown RBP9.61□□□□□ -0.87
VPS33A-201ENST00000267199 GPR183P32249 361 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 OR9G1Q8NH87 305 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 MCRIP2Q9BUT9 160 aaKnown RBP9.61□□□□□ -0.87
VPS33A-201ENST00000267199 C19orf24Q9BVV8 132 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 GNB1LQ9BYB4 327 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 COL4A4P53420 1690 aaPredicted RBP9.61□□□□□ -0.87
VPS33A-201ENST00000267199 IGHV2OR16-5A0A0B4J2B6 119 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 DMRTC2Q8IXT2 367 aaPredicted RBP9.61□□□□□ -0.87
VPS33A-201ENST00000267199 C9orf106Q8NAJ2 232 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 S4R3C0 116 aa9.61□□□□□ -0.87
VPS33A-201ENST00000267199 STAG3L2P0CL84 134 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 STAG3L3P0CL85 134 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 C20orf204Q6ZNR8 217 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 OSTCQ9NRP0 149 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 CHD3Q12873 2000 aaKnown RBP9.6□□□□□ -0.87
VPS33A-201ENST00000267199 PSPNO60542 156 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 KIF26AQ9ULI4 1882 aaPredicted RBP9.6□□□□□ -0.87
VPS33A-201ENST00000267199 GTF3C1Q12789 2109 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 TRAV5A0A0B4J249 113 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 FOXH1O75593 365 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 SFTPCP11686 197 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 WDR82Q6UXN9 313 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 FAM216BQ8N7L0 139 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 DNAH12Q6ZR08 3092 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 RSPO1Q2MKA7 263 aaPredicted RBP9.6□□□□□ -0.87
VPS33A-201ENST00000267199 ASCL5Q7RTU5 278 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
VPS33A-201ENST00000267199 TMEM160Q9NX00 188 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
VPS33A-201ENST00000267199 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 IL15RAQ13261 267 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 FAM27E3Q08E93 113 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 TMEM144Q7Z5S9 345 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 SPRR3Q9UBC9 169 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 ANAPC10Q9UM13 185 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 ARHGAP21Q5T5U3 1957 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 M0QZ24 198 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 GPX1P07203 203 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 MC5RP33032 325 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF726P1Q15940 193 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 ASCL4Q6XD76 172 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 RAB1BQ9H0U4 201 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 PCNTO95613 3336 aa9.59□□□□□ -0.87
VPS33A-201ENST00000267199 NUP210Q8TEM1 1887 aaPredicted RBP9.59□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF106Q9H2Y7 1883 aaKnown RBP9.59□□□□□ -0.87
VPS33A-201ENST00000267199 IGKV1-6A0A0C4DH72 117 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 IL18BPO95998 194 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 TIMM23BQ5SRD1 257 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 OR4C13Q8NGP0 309 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 M0R3E3 92 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 PAX9P55771 341 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 FOXF2Q12947 444 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 SRSF7Q16629 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS33A-201ENST00000267199 PRELID3AQ96N28 172 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 TYMSP04818 313 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 SELLP14151 372 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 RNASEH2CQ8TDP1 164 aaKnown RBP9.58□□□□□ -0.88
VPS33A-201ENST00000267199 GPR82Q96P67 336 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 PCNX3Q9H6A9 2034 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 IGHV3OR16-13A0A075B7E8 117 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 IGHV3-74A0A0B4J1X5 117 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 TSPOP30536 169 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 DUTP33316 252 aaKnown RBP9.58□□□□□ -0.88
VPS33A-201ENST00000267199 DLX1P56177 255 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 UBE2V1Q13404 147 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 ECSCRQ19T08 205 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 KHDC1LQ5JSQ8 128 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 C1orf162Q8NEQ5 155 aaPredicted RBP9.58□□□□□ -0.88
VPS33A-201ENST00000267199 OR1N2Q8NGR9 330 aa9.58□□□□□ -0.88
VPS33A-201ENST00000267199 TRAV3A0A0B4J244 114 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 HERVK_113P61574 105 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 FBXL7Q9UJT9 491 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 IGHV3OR16-8A0A075B7F1 116 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 A0A087X0K7 114 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 A0A1W2PRE2 83 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 IGKV1D-33P01593 117 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 IGKV1-33P01594 117 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 ZNF788Q6ZQV5 615 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 MGST2Q99735 147 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 PCDH15Q96QU1 1955 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms