RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FAM90A27PA6NNH2 459 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 LYNX1G3V0Z9 82 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ENSAO43768 121 aaKnown RBP10.42□□□□□ -0.74
CPSF6-201ENST00000266679 SLC25A17O43808 307 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 IGLV2-23P01705 113 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 IGHV3-48P01763 117 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 OR5G3P0C626 314 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 OR10J4P0C629 311 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 IGHV1-8P0DP01 117 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 LYNX1P0DP58 116 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 LCN2P80188 198 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 HLA-DRB5Q30154 266 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 VSTM2AQ8TAG5 236 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ZNF596Q8TC21 504 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 ST6GALNAC6Q969X2 333 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM167BQ9NRX6 74 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 DMRT1Q9Y5R6 373 aa10.42□□□□□ -0.74
CPSF6-201ENST00000266679 AMBPP02760 352 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 REG1AP05451 166 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 APOBEC3AP31941 199 aaPredicted RBP10.41□□□□□ -0.74
CPSF6-201ENST00000266679 RPL15P61313 204 aaKnown RBP10.41□□□□□ -0.74
CPSF6-201ENST00000266679 C8orf31Q8N9H6 132 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 LINC01560Q8TB33 94 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 RITA1Q96K30 269 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 ADGRG4Q8IZF6 3080 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 TACC2O95359 2948 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 TRAV20A0A0B4J274 112 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 SLC17A3O00476 420 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 AREGP15514 252 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 CRYBB3P26998 211 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 VKORC1Q9BQB6 163 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
CPSF6-201ENST00000266679 TRAV5A0A0B4J249 113 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 GPX4P36969 197 aaPredicted RBP10.4□□□□□ -0.74
CPSF6-201ENST00000266679 TAS2R45P59539 299 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 FOXL1Q12952 345 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 VMA21Q3ZAQ7 101 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 CENPWQ5EE01 88 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 MORN5Q5VZ52 161 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 ST6GALNAC3Q8NDV1 305 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 EAF1Q96JC9 268 aaPredicted RBP10.4□□□□□ -0.74
CPSF6-201ENST00000266679 TMEM133Q9H2Q1 129 aa10.4□□□□□ -0.74
CPSF6-201ENST00000266679 B9A039 149 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 C9JCJ5 164 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 ZNF137PP52743 207 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 OR5I1Q13606 314 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
CPSF6-201ENST00000266679 C9orf152Q5JTZ5 239 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 PQLC2Q6ZP29 291 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 CACNG8Q8WXS5 425 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
CPSF6-201ENST00000266679 CHODLQ9H9P2 273 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 NAV3Q8IVL0 2385 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 MYO9AB2RTY4 2548 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 A0A087X0M5 115 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 A0A1B0GX30 115 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 GGTLC3B5MD39 225 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 INS-IGF2F8WCM5 200 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 C8orf88P0DMB2 117 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
CPSF6-201ENST00000266679 PNKDQ8N490 385 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 NPIPB3Q92617 1050 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
CPSF6-201ENST00000266679 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 GNG4P50150 75 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
CPSF6-201ENST00000266679 SUB1P53999 127 aaKnown RBP eCLIP10.38□□□□□ -0.751e-8■■■■■ 40.1
CPSF6-201ENST00000266679 UBE2L3P68036 154 aaKnown RBP10.38□□□□□ -0.75
CPSF6-201ENST00000266679 ZNF90Q03938 601 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 C11orf42Q8N5U0 333 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 RNASEH2CQ8TDP1 164 aaKnown RBP10.38□□□□□ -0.75
CPSF6-201ENST00000266679 SLC25A33Q9BSK2 321 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 PRDM13Q9H4Q3 707 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 IL36BQ9NZH7 164 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 MRPL36Q9P0J6 103 aaKnown RBP10.38□□□□□ -0.75
CPSF6-201ENST00000266679 APCP25054 2843 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 FBN2P35556 2912 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 HELTA6NFD8 242 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 CNTFRP26992 372 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 PPOXP50336 477 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 PDLIM4P50479 330 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 MRGPRG-AS1Q2M3A8 158 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 OR5AU1Q8NGC0 362 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 MRPL32Q9BYC8 188 aaKnown RBP10.38□□□□□ -0.75
CPSF6-201ENST00000266679 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
CPSF6-201ENST00000266679 IGHV2-26A0A0B4J1V2 119 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 APELAP0DMC3 54 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 HIST1H1BP16401 226 aaKnown RBP10.37□□□□□ -0.75
CPSF6-201ENST00000266679 MC5RP33032 325 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 ERVFC1-1P60608 527 aa10.37□□□□□ -0.75
CPSF6-201ENST00000266679 C19orf35Q6ZS72 473 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms