RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SMIM12Q96EX1 92 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 MIOXQ9UGB7 285 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 AMBPP02760 352 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 NHLH1Q02575 133 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 ETFRF1Q6IPR1 90 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 NPBQ8NG41 125 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 ISLRO14498 428 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 NDUFA3O95167 84 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 TAS2R60P59551 318 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 KLK9Q2XQG4 91 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 C10orf55Q5SWW7 151 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 LINC01560Q8TB33 94 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
MSH3-201ENST00000265081 CDC42EP3Q9UKI2 254 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 KLK9Q9UKQ9 250 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 AMMECR1Q9Y4X0 333 aaPredicted RBP8.92□□□□□ -0.98
MSH3-201ENST00000265081 ADGRG4Q8IZF6 3080 aa8.92□□□□□ -0.98
MSH3-201ENST00000265081 MDFIC2A0A1B0GVS7 189 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 A0A1W2PPQ1 181 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 LINC00587B1AMM8 73 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 M0R1W7 72 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 CORTO00230 105 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 LDLRAD2Q5SZI1 272 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 FAM231DQ6ZW35 169 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 MAP1BP46821 2468 aaKnown RBP8.91□□□□□ -0.98
MSH3-201ENST00000265081 TRBV9A0A0B4J1U6 114 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 SLC25A17O43808 307 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 GATA2P23769 480 aaPredicted RBP8.91□□□□□ -0.98
MSH3-201ENST00000265081 S100A2P29034 98 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 ZNF329Q86UD4 541 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 MRPL41Q8IXM3 137 aaKnown RBP8.91□□□□□ -0.98
MSH3-201ENST00000265081 KIR3DL3Q8N743 410 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 MBD6Q96DN6 1003 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 KLF12Q9Y4X4 402 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 F11RQ9Y624 299 aaKnown RBP8.91□□□□□ -0.98
MSH3-201ENST00000265081 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 JOSD1Q15040 202 aaPredicted RBP8.91□□□□□ -0.98
MSH3-201ENST00000265081 CDPF1Q6NVV7 123 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 C1orf122Q6ZSJ8 110 aa8.91□□□□□ -0.98
MSH3-201ENST00000265081 HRNRQ86YZ3 2850 aaPredicted RBP8.91□□□□□ -0.98
MSH3-201ENST00000265081 HINT2Q9BX68 163 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 CBLN4Q9NTU7 201 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 ZGRF1Q86YA3 2104 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 CENPWQ5EE01 88 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 GBGT1Q8N5D6 347 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 SGMS2Q8NHU3 365 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 PIEZO2Q9H5I5 2752 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 DCHS2Q6V1P9 2916 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 PPIAL4CA0A0B4J2A2 164 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 I3L2K1 104 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 PPIAL4GP0DN37 164 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 HOXB4P17483 251 aaPredicted RBP8.9□□□□□ -0.98
MSH3-201ENST00000265081 CNTFRP26992 372 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 ZNF90Q03938 601 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 OR10D4PQ8NGN7 298 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 RAXQ9Y2V3 346 aa8.9□□□□□ -0.98
MSH3-201ENST00000265081 HELTA6NFD8 242 aa8.9□□□□□ -0.99
MSH3-201ENST00000265081 PCP4L1A6NKN8 68 aa8.9□□□□□ -0.99
MSH3-201ENST00000265081 GVINP1Q7Z2Y8 2422 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 XKRY2A2RUG3 117 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 ACTL6BO94805 426 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 GP9P14770 177 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 CNN1P51911 297 aaKnown RBP8.89□□□□□ -0.99
MSH3-201ENST00000265081 BPIFB3P59826 476 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 C4orf17Q53FE4 359 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 TPTE2P1Q5T6R2 138 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 PPP1R27Q86WC6 154 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 NEU4Q8WWR8 484 aaPredicted RBP8.89□□□□□ -0.99
MSH3-201ENST00000265081 NPIPB3Q92617 1050 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 TP53TG3Q9ULZ0 132 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 CRYBB3P26998 211 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 OR8B3Q8NGG8 313 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 WIPF2Q8TF74 440 aaPredicted RBP8.89□□□□□ -0.99
MSH3-201ENST00000265081 ZNF48Q96MX3 618 aaPredicted RBP8.89□□□□□ -0.99
MSH3-201ENST00000265081 OR8B2Q96RD0 313 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 CCL21O00585 134 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 LIPFP07098 398 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 RPL27AP46776 148 aaKnown RBP8.89□□□□□ -0.99
MSH3-201ENST00000265081 LINC00310P59036 64 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 CX3CL1P78423 397 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 Q8N6K4 173 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 ZNF355PQ9NSJ1 428 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 TMEM14CQ9P0S9 112 aa8.89□□□□□ -0.99
MSH3-201ENST00000265081 TRAV5A0A0B4J249 113 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 TRBV6-1A0A0K0K1D8 114 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 GNG4P50150 75 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 STXBP6Q8NFX7 210 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 FABP4P15090 132 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 EBI3Q14213 229 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 LYNX1G3V0Z9 82 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 LYNX1P0DP58 116 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 GZMBP10144 247 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 RPEL1Q2QD12 228 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 OR5AU1Q8NGC0 362 aa8.88□□□□□ -0.99
MSH3-201ENST00000265081 AURKAIP1Q9NWT8 199 aaPredicted RBP8.88□□□□□ -0.99
MSH3-201ENST00000265081 ZZEF1O43149 2961 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 FAM90A27PA6NNH2 459 aa8.87□□□□□ -0.99
MSH3-201ENST00000265081 Q0VG73 95 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms