RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 UBQLN2Q9UHD9 624 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 TMEM187Q14656 261 aa11.95□□□□□ -0.5
USE1-201ENST00000263897 ODF3L2Q3SX64 289 aa11.95□□□□□ -0.5
USE1-201ENST00000263897 ZNF600Q6ZNG1 722 aa11.95□□□□□ -0.5
USE1-201ENST00000263897 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
USE1-201ENST00000263897 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
USE1-201ENST00000263897 MCUBQ9NWR8 336 aa11.95□□□□□ -0.5
USE1-201ENST00000263897 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
USE1-201ENST00000263897 HTR2BP41595 481 aa11.94□□□□□ -0.5
USE1-201ENST00000263897 FAM90A2PQ658T7 463 aa11.94□□□□□ -0.5
USE1-201ENST00000263897 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
USE1-201ENST00000263897 IL22RA2Q969J5 263 aa11.94□□□□□ -0.5
USE1-201ENST00000263897 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
USE1-201ENST00000263897 GINS3Q9BRX5 216 aa11.94□□□□□ -0.5
USE1-201ENST00000263897 HEYLQ9NQ87 328 aaPredicted RBP11.94□□□□□ -0.5
USE1-201ENST00000263897 MRPL36Q9P0J6 103 aaKnown RBP11.94□□□□□ -0.5
USE1-201ENST00000263897 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
USE1-201ENST00000263897 IGHV3OR16-13A0A075B7E8 117 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 IGHV3-74A0A0B4J1X5 117 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 A0A1B0GU03 582 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 CCDC160A6NGH7 325 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 CLN5O75503 358 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 AKR1C4P17516 323 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 OPRK1P41145 380 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
USE1-201ENST00000263897 PYDC2Q56P42 97 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
USE1-201ENST00000263897 CEBPZOSA8MTT3 80 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 APOHP02749 345 aaPredicted RBP11.92□□□□□ -0.5
USE1-201ENST00000263897 CD5P06127 495 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 SULT1A3P0DMM9 295 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 SULT1A4P0DMN0 295 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 SUPT4H1P63272 117 aaKnown RBP11.92□□□□□ -0.5
USE1-201ENST00000263897 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
USE1-201ENST00000263897 C2orf83Q53S99 150 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 LILRB2Q8N423 598 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 IL17DQ8TAD2 202 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 PRR13Q9NZ81 148 aa11.92□□□□□ -0.5
USE1-201ENST00000263897 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 A0A0B4J2A0 478 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 UBE2CO00762 179 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 S100A5P33763 92 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 BMI1P35226 326 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 FAUP35544 74 aaKnown RBP11.91□□□□□ -0.5
USE1-201ENST00000263897 TFPI2P48307 235 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 APOC4P55056 127 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 AP3S2P59780 193 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 NMSQ5H8A3 153 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 Q6ZWC4 215 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 TOMM5Q8N4H5 51 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 ST8SIA2Q92186 375 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 TRIM63Q969Q1 353 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 RBM38Q9H0Z9 239 aaKnown RBP11.91□□□□□ -0.5
USE1-201ENST00000263897 SHPKQ9UHJ6 478 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 V9GYH0 126 aa11.91□□□□□ -0.5
USE1-201ENST00000263897 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 KIR2DL5BA0A0G2JN68 375 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 KIR2DL5BA0A0G2JPC4 375 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 RPS10-NUDT3A0A1W2PQS6 291 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 NPPCP23582 126 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 CCR6P51684 374 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 PAFAH1B2P68402 229 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 ZNF79Q15937 498 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 CCDC190Q86UF4 302 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 APRG1Q8IVJ8 170 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 KIR2DL5AQ8N109 375 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 LGI3Q8N145 548 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 GBGT1Q8N5D6 347 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
USE1-201ENST00000263897 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
USE1-201ENST00000263897 ZNF701M0R085 212 aaPredicted RBP11.89□□□□□ -0.51
USE1-201ENST00000263897 SCGB2A1O75556 95 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 DFFBO76075 338 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 SLC25A4P12235 298 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 ANXA3P12429 323 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 TNFRSF9Q07011 255 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 SMCO1Q147U7 214 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 TIGITQ495A1 244 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 NOXA1Q86UR1 476 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 WFDC3Q8IUB2 231 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 DEDD2Q8WXF8 326 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 TP53TG1Q9Y2A0 90 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 CSMD3Q7Z407 3707 aa11.89□□□□□ -0.51
USE1-201ENST00000263897 RYR3Q15413 4870 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 LCE6AA0A183 80 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 A0A1W2PS18 150 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 SPRY2O43597 315 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 NXPH3O95157 252 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms