RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 LOC101059948A0A1B0GTJ6 334 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 OR10J3Q5JRS4 329 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 GPR183P32249 361 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 LEPP41159 167 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 TGIF1Q15583 401 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 IGKV1D-33P01593 117 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 IGKV1-33P01594 117 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 MS4A6AQ9H2W1 248 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 IFI27P40305 119 aaPredicted RBP14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 DUX3Q96PT4 197 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 SPSB2Q99619 263 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 NXT2Q9NPJ8 142 aaKnown RBP14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 C21orf62Q9NYP8 219 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 ZP1P60852 638 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 NEU4Q8WWR8 484 aaPredicted RBP14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 ZNF703Q9H7S9 590 aaPredicted RBP14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 SPANXA1Q9NS26 97 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 ZNF257Q9Y2Q1 563 aa14.72□□□□□ -0.05
NOTCH3-201ENST00000263388 PRR14LQ5THK1 2151 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 LINC00312Q9Y6C7 94 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 ZNF585BQ52M93 769 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 HOXA3O43365 443 aaPredicted RBP14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 REPIN1Q9BWE0 567 aaKnown RBP14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 GREM1O60565 184 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 CSRP3P50461 194 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 C1QL2Q7Z5L3 287 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 TMEM86BQ8N661 226 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 ASCL2Q99929 193 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 MRPS18CQ9Y3D5 142 aaKnown RBP14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 PCDH15Q96QU1 1955 aa14.71□□□□□ -0.05
NOTCH3-201ENST00000263388 ZNHIT1O43257 154 aa14.71□□□□□ -0.06
NOTCH3-201ENST00000263388 LGALS1P09382 135 aaKnown RBP14.71□□□□□ -0.06
NOTCH3-201ENST00000263388 MEGF9Q9H1U4 602 aa14.71□□□□□ -0.06
NOTCH3-201ENST00000263388 TOMM7Q9P0U1 55 aa14.71□□□□□ -0.06
NOTCH3-201ENST00000263388 BSPH1Q075Z2 132 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 TMEM42Q69YG0 159 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 TMEM190Q8WZ59 177 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 ZIC4Q8N9L1 334 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 LINC01559Q495D7 138 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 FDCSPQ8NFU4 85 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 C12orf77C9JDV5 145 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 RNASE4P34096 147 aaKnown RBP14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 ZNF562Q6V9R5 426 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 EGR1P18146 543 aa14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 CITED2Q99967 270 aaPredicted RBP14.7□□□□□ -0.06
NOTCH3-201ENST00000263388 LDLRAD4O15165 306 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 FBXL7Q9UJT9 491 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 TMEM249Q2WGJ8 235 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 OVOL2Q9BRP0 275 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 MALRD1Q5VYJ5 2156 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 GDF15Q99988 308 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 CECR9P0C854 216 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 GNB1LQ9BYB4 327 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 DPM2O94777 84 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 ATXN8Q156A1 80 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 MYOD1P15172 320 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 C18orf12Q96KH6 178 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 OTORQ9NRC9 128 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 FBLN7Q53RD9 439 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 PRDM13Q9H4Q3 707 aa14.69□□□□□ -0.06
NOTCH3-201ENST00000263388 A8MWV9 139 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 A0A0G2JK05 382 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 PROB1E7EW31 1015 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 FAM19A2Q8N3H0 131 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 IQCF6A8MYZ5 107 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 FAM57AQ8TBR7 257 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 COQ2Q96H96 371 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 FNDC4Q9H6D8 234 aaPredicted RBP14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 LAMTOR2Q9Y2Q5 125 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 TANC1Q9C0D5 1861 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 H3BUT2 72 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 TGFAP01135 160 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 C17orf98A8MV24 154 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 LINC00614P0C842 121 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 LAIR2Q6ISS4 152 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 COL4A5P29400 1685 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 YPEL1O60688 119 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 S100A7L2Q5SY68 101 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 YPEL2Q96QA6 119 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 C15orf61A6NNL5 157 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 SRSF1Q07955 248 aaKnown RBP eCLIP14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 C19orf48Q6RUI8 117 aa14.68□□□□□ -0.06
NOTCH3-201ENST00000263388 SEC11AP67812 179 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 PPP1R27Q86WC6 154 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 TIAF1O95411 115 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 ZNF497Q6ZNH5 498 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 FBXL15Q9H469 300 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 IGHV3-35A0A0C4DH35 117 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 FAM90A9PA6NNJ1 464 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 CCL20P78556 96 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 DTX2Q86UW9 622 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 ZNF106Q9H2Y7 1883 aaKnown RBP14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 IGHV2OR16-5A0A0B4J2B6 119 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 CTSBP07858 339 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 IGFBP3P17936 291 aaPredicted RBP14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 GAGE13Q4V321 117 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 TMEM144Q7Z5S9 345 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 LINC01549A6NIU2 74 aa14.67□□□□□ -0.06
NOTCH3-201ENST00000263388 MSGN1A6NI15 193 aa14.66□□□□□ -0.06
NOTCH3-201ENST00000263388 PPBPP02775 128 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms