RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 RPLP1P05386 114 aaKnown RBP13.41□□□□□ -0.26
ZNF541-201ENST00000263351 C3orf79P0CE67 100 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 PAFAH1B2P68402 229 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 TIGITQ495A1 244 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 PPP1R35Q8TAP8 253 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 TMEM183BQ1AE95 376 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 SPATA45Q537H7 98 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 DEFB124Q8NES8 71 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 C20orf144Q9BQM9 153 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 SLC25A33Q9BSK2 321 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 ISLRO14498 428 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 MT-CO2P00403 227 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 MOSP00540 346 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 ESDP10768 282 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 CAMPP49913 170 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 RANP62826 216 aaKnown RBP13.4□□□□□ -0.26
ZNF541-201ENST00000263351 TNFAIP6P98066 277 aaPredicted RBP13.4□□□□□ -0.26
ZNF541-201ENST00000263351 LEMD1Q68G75 181 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 PATE2Q6UY27 113 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 C1orf162Q8NEQ5 155 aaPredicted RBP13.4□□□□□ -0.26
ZNF541-201ENST00000263351 TXNDC17Q9BRA2 123 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
ZNF541-201ENST00000263351 ZNF292O60281 2723 aa13.4□□□□□ -0.26
ZNF541-201ENST00000263351 ZFHX3Q15911 3703 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 CGB1A6NKQ9 187 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 RPL8P62917 257 aaKnown RBP13.39□□□□□ -0.27
ZNF541-201ENST00000263351 WT1-ASQ06250 92 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 Q0VG73 95 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 STUMQ69YW2 141 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 SPATA12Q7Z6I5 190 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 BLNKQ8WV28 456 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 SARAFQ96BY9 339 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 HARBI1Q96MB7 349 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 TMEM68Q96MH6 324 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 GNB1LQ9BYB4 327 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 FAM215AQ9Y5M1 114 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 A0A1B0GWJ7 208 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 TOX4O94842 621 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 USF1P22415 310 aaPredicted RBP13.39□□□□□ -0.27
ZNF541-201ENST00000263351 RAB7AP51149 207 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 STPG4Q8N801 248 aa13.39□□□□□ -0.27
ZNF541-201ENST00000263351 DLEU1O43261 78 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 ERASQ7Z444 233 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 IGFBPL1Q8WX77 278 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 KCNS1Q96KK3 526 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 OR5G3P0C626 314 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 MFAP2P55001 183 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 TNXAQ16473 311 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 RNF7Q9UBF6 113 aa13.38□□□□□ -0.27
ZNF541-201ENST00000263351 PSMB11A5LHX3 300 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 KIR2DS2P43631 304 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 C21orf62-AS1Q17RA5 79 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 LINC00322Q6ZN03 302 aaPredicted RBP13.37□□□□□ -0.27
ZNF541-201ENST00000263351 ZNF586Q9NXT0 402 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 ABCA4P78363 2273 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 M0R296 226 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 C8orf88P0DMB2 117 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 CTRLP40313 264 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 PPOXP50336 477 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 CD69Q07108 199 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 HCP5Q6MZN7 132 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 ST6GALNAC6Q969X2 333 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 MCRIP2Q9BUT9 160 aaKnown RBP13.37□□□□□ -0.27
ZNF541-201ENST00000263351 TMEM167BQ9NRX6 74 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 SH3BGRL2Q9UJC5 107 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 PRNDQ9UKY0 176 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 GOLT1BQ9Y3E0 138 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 MED13LQ71F56 2210 aa13.37□□□□□ -0.27
ZNF541-201ENST00000263351 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
ZNF541-201ENST00000263351 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 SLC25A48Q6ZT89 311 aaKnown RBP13.36□□□□□ -0.27
ZNF541-201ENST00000263351 C18orf32Q8TCD1 76 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 CLEC7AQ9BXN2 247 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 SLC25A10Q9UBX3 287 aaPredicted RBP13.36□□□□□ -0.27
ZNF541-201ENST00000263351 RPUSD1Q9UJJ7 312 aaKnown RBP13.36□□□□□ -0.27
ZNF541-201ENST00000263351 CEP295Q9C0D2 2601 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 HYPMO75409 117 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 APCSP02743 223 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 AMY1AP04745 511 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 TCF24Q7RTU0 167 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 SPACA3Q8IXA5 215 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 C1orf174Q8IYL3 243 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 OSTCQ9NRP0 149 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 CUL9Q8IWT3 2517 aa13.36□□□□□ -0.27
ZNF541-201ENST00000263351 ORM2P19652 201 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 GLRXP35754 106 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 CFHR2P36980 270 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 FOXA3P55318 350 aaPredicted RBP13.35□□□□□ -0.27
ZNF541-201ENST00000263351 LYPD2Q6UXB3 125 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 NUP35Q8NFH5 326 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 NUDT10Q8NFP7 164 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 NUDT11Q96G61 164 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 AMMECR1Q9Y4X0 333 aaPredicted RBP13.35□□□□□ -0.27
ZNF541-201ENST00000263351 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms